Mercurial > repos > mmonsoor > camera_combinexsannos
annotate planemo_test.sh @ 9:a3024f51082d draft
planemo upload commit 239d7043ccba9d1d1861d7d8ac353c77497e0880
author | lecorguille |
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date | Wed, 29 Nov 2017 10:03:55 -0500 |
parents | 87570e9b71f5 |
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87570e9b71f5
planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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1 # Example of planemo command to launch test |
87570e9b71f5
planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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2 |
87570e9b71f5
planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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3 # Note: --galaxy_branch "dev" is set to deal with zip file |
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planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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4 |
87570e9b71f5
planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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5 |
87570e9b71f5
planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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6 # -- Use of conda dependencies |
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planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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7 planemo conda_init --conda_prefix /tmp/mc |
87570e9b71f5
planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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8 planemo conda_install --conda_prefix /tmp/mc . |
87570e9b71f5
planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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9 planemo test --install_galaxy --conda_prefix /tmp/mc --conda_dependency_resolution --galaxy_branch "dev" |
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planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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10 |
87570e9b71f5
planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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11 #All 1 test(s) executed passed. |
87570e9b71f5
planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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12 #abims_CAMERA_combinexsAnnos[0]: passed |
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planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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13 |
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planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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14 |
87570e9b71f5
planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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15 # -- Use of shed_test |
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planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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16 planemo shed_test --install_galaxy -t testtoolshed |
87570e9b71f5
planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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17 |
87570e9b71f5
planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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18 #All 1 test(s) executed passed. |
87570e9b71f5
planemo upload commit 9d47e3b467dbbe0af0d90a937c5e9f2c4b958c4b
lecorguille
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19 #testtoolshed.g2.bx.psu.edu/repos/mmonsoor/camera_combinexsannos/abims_CAMERA_combinexsAnnos/2.0.4[0]: passed |