comparison butterfly_crossplot.xml @ 2:c29354d16967 draft

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author mnhn65mo
date Mon, 13 Aug 2018 04:55:07 -0400
parents af2cdd97a434
children 9daba7983d38
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1:c5a10acd34e3 2:c29354d16967
1 <tool id="Butterfly_crossplot" name="Butterfly data analysis" version="0.1.0">
2 <requirements>
3 <requirement type="package" version="2.2.1">r-ggplot2</requirement>
4 <requirement type="package" version="1.1_2">r-rcolorbrewer</requirement>
5 </requirements>
6 <command detect_errors="exit_code"><![CDATA[
7 Rscript '$__tool_directory__/butterfly_crossplot.R' '$__tool_directory__/stat_bag.r' '$butterfly_db' '$__tool_directory__/code_couleurs.csv' '$function'
8 ##'$__tool_directory__/BDD_PAPILLONS_2016.txt'
9 ]]></command>
10 <inputs>
11 <param name="function" type="select" label="Chose your analyse">
12 <option value="ggCompareLevel">Compare production methods</option>
13 <option value="ggfiltre1niveau">Compare regions</option>
14 <option value="gglocal">Compare local networks</option>
15 </param>
16 <param name="butterfly_db" type="data" format="csv,tabular" label="Butterfly datafile"/>
17 </inputs>
18 <outputs>
19 <data format="png" name="ggCompareLevel" label="Compare production methods" from_work_dir="resultats/Papillons_CONDUITEPARCELLE_comparaison.png">
20 <filter>function=='ggCompareLevel'</filter>
21 </data>
22 <collection type="list" name="output_ggfiltre" label="Compare regions">
23 <discover_datasets pattern="__designation_and_ext__" visible="false" format="png" directory="resultats"/>
24 <filter>function=='ggfiltre1niveau'</filter>
25 </collection>
26 <collection type="list" name="output_gglocal" label="Compare local network">
27 <discover_datasets pattern="__designation_and_ext__" visible="false" format="png" directory="resultats"/>
28 <filter>function=='gglocal'</filter>
29 </collection>
30 </outputs>
31 <help><![CDATA[
32 TODO: Fill in help.
33 ]]></help>
34 </tool>