annotate rdata_reader.xml @ 1:5184899fd06e draft default tip

Uploaded
author mnhn65mo
date Tue, 07 Aug 2018 08:23:15 -0400
parents 10212598b005
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
1 <tool id="Rdata_reader" name="Rdata binary file reader" version="0.1">
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
2 <requirements>
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
3 <requirement type="package" version="1.20.0">r-getopt</requirement>
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
4 <requirement type="package" version="7.0">readline</requirement>
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
5 </requirements>
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
6 <command detect_errors="exit_code"><![CDATA[
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
7 Rscript '$__tool_directory__/rdata_reader.R' '$input1' '$rdata_list_attr' ]]>
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
8 </command>
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
9 <inputs>
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
10 <param format="rdata" name="input1" type="data" label="Rdata binary file to explore"/>
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
11 </inputs>
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
12 <outputs>
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
13 <data format="tabular" name="rdata_list_attr" from_work_dir="rdata_list_attr" />
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
14 </outputs>
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
15 <help>
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
16 ==========================
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
17 Rdata reader
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
18 ==========================
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
19 **What it does**
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
20
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
21 The Rdata reader tool give information on the content of a binary R file.
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
22
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
23 It produces a list of the available dimensions in the Rdata (tabular output file).
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
24
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
25 Use this tool before considering use "Rdata parser".
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
26
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
27 |
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
28
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
29 **How to use it**
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
30
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
31 Select a file in the Rdata format and execute the tool.
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
32 </help>
10212598b005 Uploaded
mnhn65mo
parents:
diff changeset
33 </tool>