# HG changeset patch # User modencode-dcc # Date 1360203785 18000 # Node ID dfdaa943f8557c744de1be5c6f6b359b7936e7a0 # Parent 2db63ab9b129be5a2bef26c007b6526c75356970 corrected created file path diff -r 2db63ab9b129 -r dfdaa943f855 spp_wrapper.py --- a/spp_wrapper.py Fri Jan 18 19:01:39 2013 -0500 +++ b/spp_wrapper.py Wed Feb 06 21:23:05 2013 -0500 @@ -72,11 +72,11 @@ chip_name = os.path.basename(options['chip_file']) input_name = os.path.basename(options['input_file']) - created_narrow_peak = os.path.join( "/mnt/galaxyData/files/000", "%s_VS_%s.narrowPeak.gz" % (chip_name, input_name) ) + created_narrow_peak = os.path.join( tmp_dir, "%s_VS_%s.narrowPeak.gz" % (chip_name, input_name) ) if os.path.exists( created_narrow_peak ): shutil.move( created_narrow_peak, output_narrow_peak ) - created_region_peak = os.path.join( "/mnt/galaxyData/files/000", "%s_VS_%s.regionPeak.gz" % (chip_name, input_name) ) + created_region_peak = os.path.join( tmp_dir, "%s_VS_%s.regionPeak.gz" % (chip_name, input_name) ) if os.path.exists( created_region_peak ): shutil.move( created_region_peak, output_region_peak )