Mercurial > repos > muon-spectroscopy-computational-project > pm_dftb_opt
diff README-3ob @ 0:43fb752fc295 draft
planemo upload for repository https://github.com/muon-spectroscopy-computational-project/muon-galaxy-tools/main/pm_dftb_opt commit d130cf2c46d933fa9d0214ddbd5ddf860f322dc4
author | muon-spectroscopy-computational-project |
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date | Thu, 25 Aug 2022 16:18:08 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README-3ob Thu Aug 25 16:18:08 2022 +0000 @@ -0,0 +1,115 @@ +====================================================================== +3ob-3-1 +====================================================================== + +(c) 2017, Marcus Elstner, Karlsruher Institut für Technologie +All rights reserved + +This work is licensed under the Creative Commons Attribution-ShareAlike 4.0 +International License. To view a copy of this license, consult the LICENSE file +or visit http://creativecommons.org/licenses/by-sa/4.0/ . + +NOTE: The rights holder(s) for this work explicitly require that the attribution +conditions of this license are enforced. Use in part or in whole of this data is +permitted only under the condition that the scientific background of the +Licensed Material will be CITED IN ANY PUBLICATIONS ARISING FROM ITS USE. The +required references are specified in this file and must be included in resulting works. + + +Description +=========== + +This set of parameters is part of the Third-Order Parametrization for +Organic and Biological Systems (3OB) has been specifically designed +for Third Order Density Functional Tight Binding (DFTB3) and super- +sedes the MIO parameter set. Main improvements over MIO are improved +geometries for non-covalent bonds as e.g. the hydrogen bond in the +water dimer, a great reduction of the consistent overbinding and an +overall improved performance. Comprehensive benchmark tests for +C-H-N-O can be found in [JCTC2013], for P-S-* in [JCTC2014], +for Mg-Zn-* in [JCTC2015-1], and for Na-F-K-Ca-Cl-Br-I-* in +[JCTC2015-2]. + +---------------------------------------------------------------------- + +The following parameter should be generally used for DFTB3/3OB +calculations: + +zeta = 4.00 (gamma^h function exponent; DampXHExponent in DFTB+) + +---------------------------------------------------------------------- + +List of all atomic Hubbard derivatives (atomic units): +Br = -0.0573 + C = -0.1492 +Ca = -0.0340 +Cl = -0.0697 + F = -0.1623 + H = -0.1857 + I = -0.0433 + K = -0.0339 +Mg = -0.02 + N = -0.1535 +Na = -0.0454 + O = -0.1575 + P = -0.14 + S = -0.11 +Zn = -0.03 + +Maximum angular momenta for calculation input files: + +Br = "d" + C = "p" +Ca = "p" +Cl = "d" + F = "p" + H = "s" + I = "d" + K = "p" +Mg = "p" + N = "p" +Na = "p" + O = "p" + P = "d" + S = "d" +Zn = "d" + +---------------------------------------------------------------------- + +For the empirical halogend bond correction described in [JCTC2015-2] +the following parameters are provided: + +DFTB3-D3(BJ) Parameters: +a1 = 0.746 +a2 = 4.191 +s8 = 3.209 + +General X-Correction parameters (AA and kcal/mol unit system): +c1 = 7.761 +c2 = 0.050 +c3 = 4.518 + +Element Pair Parameters (AA and kcal/mol unit system): +O-Cl = 1.237 +O-Br = 1.099 +O-I = 1.313 +N-Cl = 1.526 +N-Br = 1.349 +N-I = 1.521 + + +Relevant Publications +===================== + +[JCTC2013] J. Chem. Theory Comput., 2013, 9, 338-354. +[JCTC2014] J. Chem. Theory Comput., 2014, 10, 1518–1537. +[JCTC2015-1] J. Phys. Chem. B, 2015, 119, 1062–1082. +[JCTC2015-2] J. Chem. Theory Comput., 2015, 11, 332–342. + + +Required references +=================== +O - N - C - H: [JCTC2013] +P,S-*: [JCTC2014] +Mg,Zn-*: [JCTC2015-1] +Na,F,K,Ca,Cl,Br,I-*: [JCTC2015-2]