Mercurial > repos > mvdbeek > bam_readtagger

annotate test-data/three_cluster_out.gff @ 27:9f7737be4732 draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 49b0c7b7499bb6ec64ca1d4fa3ef427b071604d7-dirty
author mvdbeek
date Fri, 28 Apr 2017 02:16:42 -0400
parents 1c91108a80d5
children 301316cb596a
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7625c594bc37 planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 14a5033994a789097d1c61d1f3318397813d3d29-dirty
mvdbeek
parents:
diff changeset
1 ##gff-version 3
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1c91108a80d5 planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit c9d087e79391f68feb0855ef87adc39ff54fbdab-dirty
mvdbeek
parents: 16
diff changeset
2 3R findcluster TE 13373515 13373524 22 + . ID=extended_and_annotated_roi.bam_0;genotype=homozygous;genotype_likelihoods=1.8828617809e-31,9.53673406912e-07,0.999999046327;left_insert=0,CTCGGAATGTATCTAACTAACAAACTCATATCAAATATAAGCAAGTGCGCCAATTCGTATGCATATGGACATATGGACATATACATATAGTAACATAATATGCTTCTCATATTACGTTTACATACTTACACTAATTGTACATACAATCTTGCACATGCATAAACACATCAAACCAGCTTACATTTTTACTTACACTTAAGCGCATGATTTGTTGTGCATCCATACCGTTATTTTTCC;left_support=11;non_support=0;right_insert=0,GACAACGAAGAAATAAAGATCCAAACTAAAAAAATACCTCGTGTTGATTCTGAAACTTCTTTAAAGGCGTTGATCTTAGTCAAACGACGGATCATTTGTTCGACTCGAATAGTAAAATACGTAAGTATATAGATAGTCTATATTAATTTTAAAAGCTCAAAGGGGCGCAAGTCTCTCTCATCAGTTGTGTCTTTAGTTTTTTTGATTTGGTTTGGTG;right_support=11;valid_TSD=False
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ffd8bf1b9ebc planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit c12b0c1b22f03c95651e19f32a2065a79a57188a-dirty
mvdbeek
parents: 15
diff changeset
3 3R findcluster TE 13374595 13374595 2 + . ID=extended_and_annotated_roi.bam_1;genotype=homozygous;genotype_likelihoods=0.0106846062525,0.329771797916,0.659543595832;left_insert=0,GTTCACCCGCGTCCGAGTTCCTGCTCCACTACTCCCTGGCTGCTGACTCACTGTTGTTATAGGGGTGGCTTCCCCTCTGTTCTTCCTGGGGGAATGCTGCATCTTCCCCAGCTCCAAAATGGCGG;left_support=2;non_support=0;right_insert=;right_support=0;valid_TSD=False
ffd8bf1b9ebc planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit c12b0c1b22f03c95651e19f32a2065a79a57188a-dirty
mvdbeek
parents: 15
diff changeset
4 3R findcluster TE 13374677 13374677 1 + . ID=extended_and_annotated_roi.bam_2;genotype=heterozygous;genotype_likelihoods=0.212598425197,0.393700787402;left_insert=;left_support=0;non_support=0;right_insert=;right_support=1;valid_TSD=False