Mercurial > repos > mvdbeek > bam_readtagger

comparison extract_variants.xml @ 64:190d64e5e32b draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit be63fdf98ea1aaa5009136c6b0f8c1311e53bb8e"
author mvdbeek
date Sun, 01 Sep 2019 16:30:54 -0400
parents e675e6d349bd
children da97e0316abc
comparison
equal deleted inserted replaced
63:e675e6d349bd 64:190d64e5e32b
1 <tool id="extract_variants" name="Extract variant fragments" version="0.5.10"> 1 <tool id="extract_variants" name="Extract variant fragments" version="0.5.11">
2 <description>from long reads</description> 2 <description>from long reads</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.5.10">readtagger</requirement> 4 <requirement type="package" version="0.5.11">readtagger</requirement>
5 </requirements> 5 </requirements>
6 <version_command>extract_variants --version</version_command> 6 <version_command>extract_variants --version</version_command>
7 <command detect_errors="aggressive"><![CDATA[ 7 <command detect_errors="aggressive"><![CDATA[
8 ln -fs '$insert_reference.fields.path' reference.fa && 8 ln -fs '$insert_reference.fields.path' reference.fa &&
9 extract_variants '$input' '$output' reference.fa 9 extract_variants '$input' '$output' reference.fa