Mercurial > repos > mvdbeek > bam_readtagger

comparison findcluster.xml @ 75:2c7f70390b7c draft

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"planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 8ee42193ec9c4778fd2bd312f53322389b0731c5"
author mvdbeek
date Mon, 23 Mar 2020 10:24:02 -0400
parents 6c15dd4415ea
children 8c3d8d38674a
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74:6c15dd4415ea 75:2c7f70390b7c
1 <tool id="findcluster" name="Find clusters of reads" version="0.5.21"> 1 <tool id="findcluster" name="Find clusters of reads" version="0.5.22">
2 <description>in bam files</description> 2 <description>in bam files</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <requirements> 6 <requirements>
7 <requirement type="package" version="0.5.21">readtagger</requirement> 7 <requirement type="package" version="0.5.22">readtagger</requirement>
8 </requirements> 8 </requirements>
9 <version_command>findcluster --version</version_command> 9 <version_command>findcluster --version</version_command>
10 <command detect_errors="aggressive"><![CDATA[ 10 <command detect_errors="aggressive"><![CDATA[
11 #import re 11 #import re
12 #set sample_name = re.sub('[^\w\-_\.\,]', '_', str( $input.element_identifier)) 12 #set sample_name = re.sub('[^\w\-_\.\,]', '_', str( $input.element_identifier))