Mercurial > repos > mvdbeek > bam_readtagger
comparison bam_readtagger.xml @ 68:47e4891b11dd draft
"planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 90941f06d4df2d8bb0804dd84159b8069a227a3e"
| author | mvdbeek |
|---|---|
| date | Wed, 04 Sep 2019 06:17:51 -0400 |
| parents | 4b10acb2d11f |
| children | 97411db5f752 |
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| 67:4b10acb2d11f | 68:47e4891b11dd |
|---|---|
| 1 <tool id="bam_readtagger" name="Tag alignment files" version="0.5.14"> | 1 <tool id="bam_readtagger" name="Tag alignment files" version="0.5.15"> |
| 2 <description>from multiple bam files</description> | 2 <description>from multiple bam files</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <requirements> | 6 <requirements> |
| 7 <requirement type="package" version="0.5.14">readtagger</requirement> | 7 <requirement type="package" version="0.5.15">readtagger</requirement> |
| 8 </requirements> | 8 </requirements> |
| 9 <command detect_errors="aggressive"><![CDATA[ | 9 <command detect_errors="aggressive"><![CDATA[ |
| 10 readtagger -t '$tag_file' -s | 10 readtagger -t '$tag_file' -s |
| 11 #for $element in $alignment_series | 11 #for $element in $alignment_series |
| 12 '$element.annotate_with':$element.r_tag:$element.m_tag | 12 '$element.annotate_with':$element.r_tag:$element.m_tag |