Mercurial > repos > mvdbeek > bam_readtagger

comparison filter_insertions.xml @ 43:6f9b1b81b593 draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 7ee4c1dd4e13a4d634b0e80efdd2309289a29a1c
author mvdbeek
date Fri, 26 Oct 2018 06:11:17 -0400
parents 5b8781514bc1
children 4870f1d6f037
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42:5b8781514bc1 43:6f9b1b81b593
1 <tool id="confirm_insertions" name="Confirm or discard insertions" version="0.4.11"> 1 <tool id="confirm_insertions" name="Confirm or discard insertions" version="0.4.12">
2 <description>based on softclips in control files</description> 2 <description>based on softclips in control files</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.4.11">readtagger</requirement> 4 <requirement type="package" version="0.4.12">readtagger</requirement>
5 </requirements> 5 </requirements>
6 <version_command>confirm_insertions --version</version_command> 6 <version_command>confirm_insertions --version</version_command>
7 <command detect_errors="aggressive"><![CDATA[ 7 <command detect_errors="aggressive"><![CDATA[
8 ln -fs $putative_insertions putative_insertions.gff && 8 ln -fs $putative_insertions putative_insertions.gff &&
9 ln -fs $all_insertions all_insertions.gff && 9 ln -fs $all_insertions all_insertions.gff &&