Mercurial > repos > mvdbeek > bam_readtagger

comparison write_supplementary_fastq.xml @ 43:6f9b1b81b593 draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 7ee4c1dd4e13a4d634b0e80efdd2309289a29a1c
author mvdbeek
date Fri, 26 Oct 2018 06:11:17 -0400
parents 4fdf606153df
children 4870f1d6f037
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42:5b8781514bc1 43:6f9b1b81b593
1 <tool id="write_supplementary_fastq" name="Extract supplementary alignments" version="0.4.11"> 1 <tool id="write_supplementary_fastq" name="Extract supplementary alignments" version="0.4.12">
2 <description>from SAM/BAM alignment files as FASTQ</description> 2 <description>from SAM/BAM alignment files as FASTQ</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.4.11">readtagger</requirement> 4 <requirement type="package" version="0.4.12">readtagger</requirement>
5 </requirements> 5 </requirements>
6 <version_command>write_supplementary_fastq --version</version_command> 6 <version_command>write_supplementary_fastq --version</version_command>
7 <command detect_errors="aggressive"><![CDATA[ 7 <command detect_errors="aggressive"><![CDATA[
8 write_supplementary_fastq --input_path '$input' --output_path '$output' 8 write_supplementary_fastq --input_path '$input' --output_path '$output'
9 ]]></command> 9 ]]></command>