Mercurial > repos > mvdbeek > bam_readtagger
comparison bam_readtagger.xml @ 27:9f7737be4732 draft
planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 49b0c7b7499bb6ec64ca1d4fa3ef427b071604d7-dirty
| author | mvdbeek |
|---|---|
| date | Fri, 28 Apr 2017 02:16:42 -0400 |
| parents | 1d71664174d9 |
| children | be95c9c82937 |
comparison
equal
deleted
inserted
replaced
| 26:1d71664174d9 | 27:9f7737be4732 |
|---|---|
| 1 <tool id="bam_readtagger" name="Tag alignment files" version="0.3.20"> | 1 <tool id="bam_readtagger" name="Tag alignment files" version="0.3.21"> |
| 2 <description>from multiple bam files</description> | 2 <description>from multiple bam files</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <requirements> | 6 <requirements> |
| 7 <requirement type="package" version="0.3.20">readtagger</requirement> | 7 <requirement type="package" version="0.3.21">readtagger</requirement> |
| 8 </requirements> | 8 </requirements> |
| 9 <command detect_errors="aggressive"><![CDATA[ | 9 <command detect_errors="aggressive"><![CDATA[ |
| 10 readtagger -t '$tag_file' -a | 10 readtagger -t '$tag_file' -a |
| 11 #for $element in $alignment_series | 11 #for $element in $alignment_series |
| 12 '$element.annotate_with':$element.r_tag:$element.m_tag | 12 '$element.annotate_with':$element.r_tag:$element.m_tag |