Mercurial > repos > mvdbeek > bam_readtagger

comparison write_supplementary_fastq.xml @ 52:b03c6d8c37c1 draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 45d0337e2a0d35e9a83d9c87c005c876c45ee054
author mvdbeek
date Wed, 12 Jun 2019 14:23:52 -0400
parents 08656cd6c989
children 5eb0ec276ea5
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51:08656cd6c989 52:b03c6d8c37c1
1 <tool id="write_supplementary_fastq" name="Extract supplementary alignments" version="0.4.19"> 1 <tool id="write_supplementary_fastq" name="Extract supplementary alignments" version="0.5.0">
2 <description>from SAM/BAM alignment files as FASTQ</description> 2 <description>from SAM/BAM alignment files as FASTQ</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.4.19">readtagger</requirement> 4 <requirement type="package" version="0.5.0">readtagger</requirement>
5 </requirements> 5 </requirements>
6 <version_command>write_supplementary_fastq --version</version_command> 6 <version_command>write_supplementary_fastq --version</version_command>
7 <command detect_errors="aggressive"><![CDATA[ 7 <command detect_errors="aggressive"><![CDATA[
8 write_supplementary_fastq --input_path '$input' --output_path '$output' 8 write_supplementary_fastq --input_path '$input' --output_path '$output'
9 ]]></command> 9 ]]></command>