Mercurial > repos > mvdbeek > bam_readtagger

diff findcluster.xml @ 38:f6311a04a6c9 draft

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planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit 6ac744bd9d610990d1d54a2c36ddfca671b15205-dirty
author mvdbeek
date Thu, 15 Mar 2018 05:13:22 -0400
parents 93f7962a3e19
children 4b1ebfcd0f46
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line diff
--- a/findcluster.xml	Sat Jan 06 07:21:25 2018 -0500
+++ b/findcluster.xml	Thu Mar 15 05:13:22 2018 -0400
@@ -1,10 +1,10 @@
-<tool id="findcluster" name="Find clusters of reads" version="0.4.6">
+<tool id="findcluster" name="Find clusters of reads" version="0.4.9">
     <description>in bam files</description>
     <macros>
         <import>macros.xml</import>
     </macros>
     <requirements>
-        <requirement type="package" version="0.4.6">readtagger</requirement>
+        <requirement type="package" version="0.4.9">readtagger</requirement>
     </requirements>
     <version_command>findcluster --version</version_command>
     <command detect_errors="aggressive"><![CDATA[
@@ -49,7 +49,7 @@
         <test>
             <param name="input" value="extended_and_annotated_roi.bam" ftype="bam"/>
             <output name="output_bam" file="three_cluster_out.bam" ftype="bam" lines_diff="2"/>
-            <output name="output_gff" file="three_cluster_out.gff" ftype="gff3" lines_diff="0"/>
+            <output name="output_gff" file="three_cluster_out.gff" ftype="gff3" lines_diff="0" sort="True"/>
         </test>
         <test>
             <param name="input" value="extended_and_annotated_roi.bam" ftype="bam"/>