Mercurial > repos > mvdbeek > bam_readtagger
view deploy.sh @ 48:72c9afb724a6 draft
planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit d71c7dbbf4deb4e3300e34a5c756f46cf7504888
author | mvdbeek |
---|---|
date | Sun, 10 Feb 2019 15:59:07 -0500 |
parents | 39d9bc17ec74 |
children |
line wrap: on
line source
#!/bin/bash # this script uploads galaxy tools in the current directory to the galaxy toolsheds set -e CURRENT_DIR=$(dirname $0) echo "Installing planemo" # Would be great if the dependencies would persist in deployment mode pip install planemo echo "Deploying to Testtoolshed ..." planemo shed_update -r --force_repository_creation -t testtoolshed --shed_key_from_env TTS_KEY "$CURRENT_DIR" echo "Deploying to Toolshed ..." planemo shed_update -r --force_repository_creation -t toolshed --shed_key_from_env TS_KEY $CURRENT_DIR echo "Successfully deployed to toolsheds" exit 0