# HG changeset patch # User mvdbeek # Date 1567524080 14400 # Node ID 96599edbf0fc0fa71caed0e33e3f443a47eb6f7c # Parent da97e0316abc61062d6604c2eb4c52ddf7216a17 "planemo upload for repository https://github.com/bardin-lab/readtagger/tree/master/galaxy commit c876b959858c0de1f28285bb78bb3d9daca40fd0" diff -r da97e0316abc -r 96599edbf0fc add_matesequence.xml --- a/add_matesequence.xml Mon Sep 02 09:45:28 2019 -0400 +++ b/add_matesequence.xml Tue Sep 03 11:21:20 2019 -0400 @@ -1,7 +1,7 @@ - + into tag field - readtagger + readtagger add_matesequence --version + modifies proper_pair flag in bam files - readtagger + readtagger + from multiple bam files macros.xml - readtagger + readtagger + from long reads - readtagger + readtagger extract_variants --version + based on softclips in control files - readtagger + readtagger confirm_insertions --version + in bam files macros.xml - readtagger + readtagger findcluster --version + as area plot between BAM files - readtagger + readtagger + of supplementary alignments - readtagger + readtagger update_mapq --version + from SAM/BAM alignment files as FASTQ - readtagger + readtagger write_supplementary_fastq --version