diff Makefile @ 0:f33e9e6a6c88 draft default tip

planemo upload for repository https://github.com/mvdbeek/dedup_hash commit 367da560c5924d56c39f91ef9c731e523825424b-dirty

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/Makefile	Wed Nov 23 07:49:05 2016 -0500
@@ -0,0 +1,53 @@
+# Location of virtualenv used for development.
+VENV?=.venv
+BRANCH=curie2
+GALAXY_REPO=https://github.com/mvdbeek/galaxy.git
+CONDA_PREFIX?=.conda
+CONDA_PREFIX_PATH?=`readlink -e .conda`
+# Source virtualenv to execute command (flake8, sphinx, twine, etc...)
+IN_VENV=if [ -f $(VENV)/bin/activate ]; then . $(VENV)/bin/activate; fi;
+PLANEMO=$(IN_VENV) planemo
+
+setup-venv: ## setup a development virutalenv in current directory
+	if [ ! -d $(VENV) ]; then virtualenv $(VENV); exit; fi;
+	$(IN_VENV) pip install -r requirements.txt;
+	$(IN_VENV) pip install planemo
+
+lint-35: setup-venv
+	$(IN_VENV) pip install tox && $(IN_VENV) tox -e py35-lint
+
+lint-27: setup-venv
+	$(IN_VENV) pip install tox && $(IN_VENV) tox -e py27-lint
+
+db:
+	if [ ! -d db_gx_rev_0127.sqlite ]; then wget https://github.com/jmchilton/galaxy-downloads/raw/master/db_gx_rev_0127.sqlite ; exit; fi;
+
+setup_galaxy_clone:
+	if [ ! -d .galaxy ]; then git clone --depth=50 --branch $(BRANCH) $(GALAXY_REPO) .galaxy; exit; fi;
+
+planemo-test: db setup-venv setup_galaxy_clone
+	if [ ! -d $(CONDA_PREFIX) ]; then $(PLANEMO) conda_init --conda_prefix $(CONDA_PREFIX);fi && \
+		$(PLANEMO) conda_install --conda_prefix $(CONDA_PREFIX_PATH) . && \
+		$(PLANEMO) test \
+		--galaxy_database_seed db_gx_rev_0127.sqlite \
+        --galaxy_root .galaxy \
+		--galaxy_source $(GALAXY_REPO) \
+		--galaxy_branch $(BRANCH) \
+		--conda_dependency_resolution \
+		--conda_prefix $(CONDA_PREFIX_PATH)
+
+planemo-serve: db setup-venv setup_galaxy_clone
+	$(PLANEMO) serve \
+        --galaxy_database_seed db_gx_rev_0127.sqlite \
+        --galaxy_root .galaxy \
+		--galaxy_source $(GALAXY_REPO) \
+		--galaxy_branch $(BRANCH) \
+		--conda_auto_install \
+		--conda_dependency_resolution \
+		--conda_prefix $(CONDA_PREFIX_PATH)
+
+py-test:
+	$(IN_VENV) python test/test_dedup_hash.py
+
+clean:
+	rm -Rf *.sqlite* .venv .conda .galaxy dist/ *.egg-info tool_test_output.* .tox  || true