Mercurial > repos > mvdbeek > package_r_3_2_1_goseq_1_22_0
comparison tool_dependencies.xml @ 5:972abb2b8432 draft
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/packages/package_r_3_2_1_goseq_1_22_0 commit 808b173b79976002d864d88077837871f88c5f2c-dirty
| author | mvdbeek |
|---|---|
| date | Tue, 23 Feb 2016 14:02:14 -0500 |
| parents | 669c224f6525 |
| children | d1457f53a14b |
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| 4:669c224f6525 | 5:972abb2b8432 |
|---|---|
| 3 <package name="R" version="3.2.1"> | 3 <package name="R" version="3.2.1"> |
| 4 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> | 4 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> |
| 5 </package> | 5 </package> |
| 6 <package name="libxml2" version="2.9.1"> | 6 <package name="libxml2" version="2.9.1"> |
| 7 <repository changeset_revision="45b16a3ab504" name="package_libxml2_2_9_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> | 7 <repository changeset_revision="45b16a3ab504" name="package_libxml2_2_9_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> |
| 8 </package> | |
| 9 <package name="libxml2" version="7.35"> | |
| 10 <repository changeset_revision="0d934b13250c" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> | |
| 8 </package> | 11 </package> |
| 9 <package name="goseq" version="1.22.0"> | 12 <package name="goseq" version="1.22.0"> |
| 10 <install version="1.0"> | 13 <install version="1.0"> |
| 11 <actions> | 14 <actions> |
| 12 <action type="setup_r_environment"> | 15 <action type="setup_r_environment"> |
| 14 <package name="R" version="3.2.1" /> | 17 <package name="R" version="3.2.1" /> |
| 15 </repository> | 18 </repository> |
| 16 <!-- libxml2 needs to be sourced after R because R also was compiled against a different version of libxml2 --> | 19 <!-- libxml2 needs to be sourced after R because R also was compiled against a different version of libxml2 --> |
| 17 <repository changeset_revision="45b16a3ab504" name="package_libxml2_2_9_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> | 20 <repository changeset_revision="45b16a3ab504" name="package_libxml2_2_9_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> |
| 18 <package name="libxml2" version="2.9.1" /> | 21 <package name="libxml2" version="2.9.1" /> |
| 22 </repository> | |
| 23 <repository changeset_revision="0d934b13250c" name="package_libcurl_7_35" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> | |
| 24 <package name="libcurl" version="7.35" /> | |
| 19 </repository> | 25 </repository> |
| 20 <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/BiasedUrn_1.07.tar.gz?raw=true</package> | 26 <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/BiasedUrn_1.07.tar.gz?raw=true</package> |
| 21 <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/BiocGenerics_0.16.1.tar.gz?raw=true</package> | 27 <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/BiocGenerics_0.16.1.tar.gz?raw=true</package> |
| 22 <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/S4Vectors_0.8.11.tar.gz?raw=true</package> | 28 <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/S4Vectors_0.8.11.tar.gz?raw=true</package> |
| 23 <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/IRanges_2.4.7.tar.gz?raw=true</package> | 29 <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/IRanges_2.4.7.tar.gz?raw=true</package> |