# HG changeset patch
# User mvdbeek
# Date 1456251974 18000
# Node ID a3af5af948c1887f4f9f82c2c614cf9bbdce3ceb
# Parent  11f12562927a644292c5c69ae4b90526916be9b5
planemo upload for repository https://github.com/ARTbio/tools-artbio/tree/master/packages/package_r_3_2_1_goseq_1_22_0 commit 808b173b79976002d864d88077837871f88c5f2c-dirty

diff -r 11f12562927a -r a3af5af948c1 tool_dependencies.xml
--- a/tool_dependencies.xml	Tue Feb 23 13:20:55 2016 -0500
+++ b/tool_dependencies.xml	Tue Feb 23 13:26:14 2016 -0500
@@ -17,35 +17,35 @@
                     <repository changeset_revision="45b16a3ab504" name="package_libxml2_2_9_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                         <package name="libxml2" version="2.9.1" />
                     </repository>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/BiasedUrn_1.07.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/BiocGenerics_0.16.1.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/S4Vectors_0.8.11.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/IRanges_2.4.7.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/GenomeInfoDb_1.6.3.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/zlibbioc_1.16.0.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/XVector_0.10.0.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/GenomicRanges_1.22.4.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/XML_3.98-1.3.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/Biostrings_2.38.4.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/bitops_1.0-6.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/RCurl_1.95-4.7.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/lambda.r_1.1.7.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/futile.options_1.0.0.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/futile.logger_1.4.1.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/snow_0.4-1.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/BiocParallel_1.4.3.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/Rsamtools_1.22.0.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/Biobase_2.30.0.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/GenomicAlignments_1.6.3.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/rtracklayer_1.30.2.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/DBI_0.3.1.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/RSQLite_1.0.0.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/AnnotationDbi_1.32.3.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/biomaRt_2.26.1.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/GenomicFeatures_1.22.13.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/geneLenDataBase_1.6.0.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/GO.db_3.2.2.tar.gz?raw=true</package>
-                        <package>https://github.com/mvdbeek/galaxy_package_sources/tree/master/package_r_3_2_1_goseq/goseq_1.22.0.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/BiasedUrn_1.07.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/BiocGenerics_0.16.1.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/S4Vectors_0.8.11.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/IRanges_2.4.7.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/GenomeInfoDb_1.6.3.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/zlibbioc_1.16.0.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/XVector_0.10.0.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/GenomicRanges_1.22.4.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/XML_3.98-1.3.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/Biostrings_2.38.4.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/bitops_1.0-6.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/RCurl_1.95-4.7.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/lambda.r_1.1.7.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/futile.options_1.0.0.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/futile.logger_1.4.1.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/snow_0.4-1.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/BiocParallel_1.4.3.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/Rsamtools_1.22.0.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/Biobase_2.30.0.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/GenomicAlignments_1.6.3.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/rtracklayer_1.30.2.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/DBI_0.3.1.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/RSQLite_1.0.0.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/AnnotationDbi_1.32.3.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/biomaRt_2.26.1.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/GenomicFeatures_1.22.13.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/geneLenDataBase_1.6.0.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/GO.db_3.2.2.tar.gz?raw=true</package>
+                        <package>https://github.com/mvdbeek/galaxy_package_sources/blob/master/package_r_3_2_1_goseq/goseq_1.22.0.tar.gz?raw=true</package>
                 </action>
             </actions>
         </install>