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1 Introduction
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4 Next Generation Sequence Analysis Pipelines (NGSAP) is to provide a user friendly platform for NGS analysis to support researchers working on myriad aspects of life sciences with post processing of the next generation sequencing data. It has beed designed specifically for transcriptomics tools available through Galaxy for data analysis which can be translated into meaningful scientific publications. NGSAP is an initiative of NGSAP team working in School of Computational and Integrative Sciences at Jawaharlal Nehru University, Delhi
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6 NGSAP provides two worlflows
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9 Denovo Assembly and differential gene analysis workflow
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12 details of the workflow
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15 Reference based assembly and differential gene analysis workflow
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17 details of the workflow
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