Mercurial > repos > nathandunn > biolinkmonarchinitiative
annotate test-data/phenotypes-for-genotype.json @ 4:49b46f044d48 draft
planemo upload commit 0dbcda86caba8f8fead7cb6fde0ae3e73d398f1e
author | nathandunn |
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date | Mon, 04 Dec 2017 19:35:12 -0500 |
parents | d40860663861 |
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d40860663861
planemo upload commit 1a35e82b210719d58263c618f9a67801db26d391
nathandunn
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1 {"compact_associations": null, "associations": [{"evidence_types": null, "slim": null, "provided_by": ["https://data.monarchinitiative.org/ttl/hpoa.ttl", "https://data.monarchinitiative.org/ttl/coriell.ttl"], "evidence_graph": {"edges": [{"pred": "RO:0002200", "sub": ":.well-known/genid/person-GM14637", "obj": "OMIM:604370"}, {"pred": "RO:0002200", "sub": "OMIM:604370", "obj": "HP:0003002"}, {"pred": "OBAN:association_has_subject", "sub": "MONARCH:ff3471ae662ab8c7", "obj": "OMIM:604370"}, {"pred": "RO:0002558", "sub": "MONARCH:ff3471ae662ab8c7", "obj": "ECO:0000501"}, {"pred": "GENO:0000222", "sub": ":.well-known/genid/person-GM14637", "obj": "dbSNPIndividual:12141"}, {"pred": "OBAN:association_has_object", "sub": "MONARCH:60c9082f62143552", "obj": "OMIM:604370"}, {"pred": "OBAN:association_has_subject", "sub": "MONARCH:60c9082f62143552", "obj": ":.well-known/genid/person-GM14637"}, {"pred": "OBAN:association_has_object", "sub": "MONARCH:ff3471ae662ab8c7", "obj": "HP:0003002"}], "nodes": [{"id": "dbSNPIndividual:12141", "lbl": "BRCA1(ARG1443TER) [GM14637]"}, {"id": "MONARCH:ff3471ae662ab8c7", "lbl": null}, {"id": ":.well-known/genid/person-GM14637", "lbl": "affected female proband with Breast cancer information core (bic) brca1/brca2 mutation panel dna samples"}, {"id": "HP:0003002", "lbl": "Breast carcinoma"}, {"id": "MONARCH:60c9082f62143552", "lbl": null}, {"id": "OMIM:604370", "lbl": "Breast-Ovarian Cancer, Familial, Susceptibility To, 1"}, {"id": "ECO:0000501", "lbl": "evidence used in automatic assertion"}]}, "relation": {"deprecated": null, "id": null, "replaced_by": null, "consider": null, "label": null, "categories": null, "synonyms": null, "description": null, "types": null}, "publications": null, "type": null, "subject_extension": null, "object": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "HP:0003002", "replaced_by": null, "consider": null, "label": "Breast carcinoma", "categories": null, "synonyms": null, "description": null, "types": null}, "id": "5ced9f3c-34fb-4066-8640-f6ae0475facb", "object_extension": null, "subject": {"taxon": {"id": "NCBITaxon:9606", "label": "Homo sapiens"}, "xrefs": null, "deprecated": null, "id": "dbSNPIndividual:12141", "replaced_by": null, "consider": null, "label": "BRCA1(ARG1443TER) [GM14637]", "categories": null, "synonyms": null, "description": null, "types": null}, "negated": false, "qualifiers": null}], "objects": ["HP:0003002"], "numFound": null, "start": null, "facet_counts": {"object_closure": {"MP:0002019": 1, "MP:0002020": 1, "HP:0011793": 1, "HP:0000001": 1, "MP:0000001": 1, "HP:0000118": 1, "BFO:0000002": 1, "HP:0011842": 1, "BFO:0000031": 1, "IAO:0000300": 1, "IAO:0000144": 1, "HP:0000765": 1, "MP:0002166": 1, "HP:0002664": 1, "HP:0000924": 1, "BFO:0000020": 1, "HP:0100013": 1, "HP:0000769": 1, "MP:0002114": 1, "IAO:0000030": 1, "HP:0009121": 1, "HP:0003002": 1, "BFO:0000001": 1, "MP:0002006": 1, "HP:0031093": 1}, "subject_taxon_label": {"Homo sapiens": 1}}, "facet_pivot": null} |