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# Biolink-Monarch

[![Build Status](https://travis-ci.org/nathandunn/biolink-monarch.svg?branch=master)](https://travis-ci.org/nathandunn/biolink-monarch)
[![DOI](https://zenodo.org/badge/94568425.svg)](https://zenodo.org/badge/latestdoi/94568425)


Wrapper around the [Monarch Iniatitive Biolink API](https://api.monarchinitiative.org/api/). 

Available on the [Galaxy Toolshed](https://toolshed.g2.bx.psu.edu/repository?repository_id=c46e72ccdb506940).

The [Monarch Intiative](https://monarchinitiative.org/) is a warehouse that integrates, aligns, and re-distributes cross-species gene, genotype, variant, disease, and phenotype data using ontology associations.

The [Biolink API](https://github.com/biolink/biolink-api) is an open API  biologically and biomedically relevant entities, and the relationships between them.



![Screen Shot](images/ScreenShot2.png)


Upload new tool.

    planemo shed_upload --shed_target toolshed