view test-data/bioentity-object-for-disease.json @ 4:49b46f044d48 draft

planemo upload commit 0dbcda86caba8f8fead7cb6fde0ae3e73d398f1e

{"compact_associations": null, "associations": [{"evidence_types": null, "slim": null, "provided_by": ["https://data.monarchinitiative.org/ttl/hpoa.ttl"], "evidence_graph": {"edges": [{"pred": "OBAN:association_has_subject", "sub": "MONARCH:14d4d1612da3d9bb", "obj": "OMIM:605543"}, {"pred": "RO:0002200", "sub": "OMIM:605543", "obj": "HP:0001300"}, {"pred": "OBAN:association_has_object", "sub": "MONARCH:14d4d1612da3d9bb", "obj": "HP:0001300"}, {"pred": "RO:0002558", "sub": "MONARCH:14d4d1612da3d9bb", "obj": "ECO:0000304"}], "nodes": [{"id": "MONARCH:14d4d1612da3d9bb", "lbl": null}, {"id": "OMIM:605543", "lbl": "Parkinson Disease 4, Autosomal Dominant"}, {"id": "ECO:0000304", "lbl": "traceable author statement used in manual assertion"}, {"id": "HP:0001300", "lbl": "Parkinsonism"}]}, "relation": {"deprecated": null, "id": "RO:0002200", "replaced_by": null, "consider": null, "label": "has phenotype", "categories": null, "synonyms": null, "description": null, "types": null}, "publications": null, "type": null, "subject_extension": null, "object": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "HP:0001300", "replaced_by": null, "consider": null, "label": "Parkinsonism", "categories": null, "synonyms": null, "description": null, "types": null}, "id": "7821d98c-7884-44ed-95b2-1e35f5b9ddc5", "object_extension": null, "subject": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "OMIM:605543", "replaced_by": null, "consider": null, "label": "Parkinson Disease 4, Autosomal Dominant", "categories": null, "synonyms": null, "description": null, "types": null}, "negated": false, "qualifiers": null}, {"evidence_types": null, "slim": null, "provided_by": ["https://data.monarchinitiative.org/ttl/hpoa.ttl"], "evidence_graph": {"edges": [{"pred": "RO:0002558", "sub": "MONARCH:09b7a86aa40ad31d", "obj": "ECO:0000304"}, {"pred": "RO:0002200", "sub": "OMIM:605543", "obj": "HP:0001824"}, {"pred": "OBAN:association_has_object", "sub": "MONARCH:09b7a86aa40ad31d", "obj": "HP:0001824"}, {"pred": "OBAN:association_has_subject", "sub": "MONARCH:09b7a86aa40ad31d", "obj": "OMIM:605543"}], "nodes": [{"id": "HP:0001824", "lbl": "Weight loss"}, {"id": "OMIM:605543", "lbl": "Parkinson Disease 4, Autosomal Dominant"}, {"id": "ECO:0000304", "lbl": "traceable author statement used in manual assertion"}, {"id": "MONARCH:09b7a86aa40ad31d", "lbl": null}]}, "relation": {"deprecated": null, "id": "RO:0002200", "replaced_by": null, "consider": null, "label": "has phenotype", "categories": null, "synonyms": null, "description": null, "types": null}, "publications": null, "type": null, "subject_extension": null, "object": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "HP:0001824", "replaced_by": null, "consider": null, "label": "Weight loss", "categories": null, "synonyms": null, "description": null, "types": null}, "id": "7186b48b-1bc6-49d7-95be-066622da0a0c", "object_extension": null, "subject": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "OMIM:605543", "replaced_by": null, "consider": null, "label": "Parkinson Disease 4, Autosomal Dominant", "categories": null, "synonyms": null, "description": null, "types": null}, "negated": false, "qualifiers": null}, {"evidence_types": null, "slim": null, "provided_by": ["https://data.monarchinitiative.org/ttl/hpoa.ttl"], "evidence_graph": {"edges": [{"pred": "RO:0002558", "sub": "MONARCH:2216fc77f599a464", "obj": "ECO:0000304"}, {"pred": "OBAN:association_has_subject", "sub": "MONARCH:2216fc77f599a464", "obj": "OMIM:605543"}, {"pred": "RO:0002200", "sub": "OMIM:605543", "obj": "HP:0002459"}, {"pred": "OBAN:association_has_object", "sub": "MONARCH:2216fc77f599a464", "obj": "HP:0002459"}], "nodes": [{"id": "HP:0002459", "lbl": "Dysautonomia"}, {"id": "OMIM:605543", "lbl": "Parkinson Disease 4, Autosomal Dominant"}, {"id": "ECO:0000304", "lbl": "traceable author statement used in manual assertion"}, {"id": "MONARCH:2216fc77f599a464", "lbl": null}]}, "relation": {"deprecated": null, "id": "RO:0002200", "replaced_by": null, "consider": null, "label": "has phenotype", "categories": null, "synonyms": null, "description": null, "types": null}, "publications": null, "type": null, "subject_extension": null, "object": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "HP:0002459", "replaced_by": null, "consider": null, "label": "Dysautonomia", "categories": null, "synonyms": null, "description": null, "types": null}, "id": "3cf231c5-9d43-44cc-8227-593e30e3751b", "object_extension": null, "subject": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "OMIM:605543", "replaced_by": null, "consider": null, "label": "Parkinson Disease 4, Autosomal Dominant", "categories": null, "synonyms": null, "description": null, "types": null}, "negated": false, "qualifiers": null}, {"evidence_types": null, "slim": null, "provided_by": ["https://data.monarchinitiative.org/ttl/hpoa.ttl"], "evidence_graph": {"edges": [{"pred": "OBAN:association_has_subject", "sub": "MONARCH:3c85131657aa47e5", "obj": "OMIM:605543"}, {"pred": "RO:0002558", "sub": "MONARCH:3c85131657aa47e5", "obj": "ECO:0000304"}, {"pred": "RO:0002200", "sub": "OMIM:605543", "obj": "HP:0100315"}, {"pred": "OBAN:association_has_object", "sub": "MONARCH:3c85131657aa47e5", "obj": "HP:0100315"}], "nodes": [{"id": "MONARCH:3c85131657aa47e5", "lbl": null}, {"id": "OMIM:605543", "lbl": "Parkinson Disease 4, Autosomal Dominant"}, {"id": "ECO:0000304", "lbl": "traceable author statement used in manual assertion"}, {"id": "HP:0100315", "lbl": "Lewy bodies"}]}, "relation": {"deprecated": null, "id": "RO:0002200", "replaced_by": null, "consider": null, "label": "has phenotype", "categories": null, "synonyms": null, "description": null, "types": null}, "publications": null, "type": null, "subject_extension": null, "object": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "HP:0100315", "replaced_by": null, "consider": null, "label": "Lewy bodies", "categories": null, "synonyms": null, "description": null, "types": null}, "id": "0257c60e-278a-43fd-ac9d-b16b4b4c5e96", "object_extension": null, "subject": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "OMIM:605543", "replaced_by": null, "consider": null, "label": "Parkinson Disease 4, Autosomal Dominant", "categories": null, "synonyms": null, "description": null, "types": null}, "negated": false, "qualifiers": null}, {"evidence_types": null, "slim": null, "provided_by": ["https://data.monarchinitiative.org/ttl/hpoa.ttl"], "evidence_graph": {"edges": [{"pred": "RO:0002200", "sub": "OMIM:605543", "obj": "HP:0001278"}, {"pred": "OBAN:association_has_subject", "sub": "MONARCH:41c427683fc3ff16", "obj": "OMIM:605543"}, {"pred": "OBAN:association_has_object", "sub": "MONARCH:41c427683fc3ff16", "obj": "HP:0001278"}, {"pred": "RO:0002558", "sub": "MONARCH:41c427683fc3ff16", "obj": "ECO:0000304"}], "nodes": [{"id": "HP:0001278", "lbl": "Orthostatic hypotension"}, {"id": "OMIM:605543", "lbl": "Parkinson Disease 4, Autosomal Dominant"}, {"id": "ECO:0000304", "lbl": "traceable author statement used in manual assertion"}, {"id": "MONARCH:41c427683fc3ff16", "lbl": null}]}, "relation": {"deprecated": null, "id": "RO:0002200", "replaced_by": null, "consider": null, "label": "has phenotype", "categories": null, "synonyms": null, "description": null, "types": null}, "publications": null, "type": null, "subject_extension": null, "object": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "HP:0001278", "replaced_by": null, "consider": null, "label": "Orthostatic hypotension", "categories": null, "synonyms": null, "description": null, "types": null}, "id": "64c7a537-bb94-4bb5-b6d4-5377151cabce", "object_extension": null, "subject": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "OMIM:605543", "replaced_by": null, "consider": null, "label": "Parkinson Disease 4, Autosomal Dominant", "categories": null, "synonyms": null, "description": null, "types": null}, "negated": false, "qualifiers": null}, {"evidence_types": null, "slim": null, "provided_by": ["https://data.monarchinitiative.org/ttl/hpoa.ttl"], "evidence_graph": {"edges": [{"pred": "RO:0002200", "sub": "OMIM:605543", "obj": "HP:0000738"}, {"pred": "OBAN:association_has_object", "sub": "MONARCH:1f875b902a02caea", "obj": "HP:0000738"}, {"pred": "OBAN:association_has_subject", "sub": "MONARCH:1f875b902a02caea", "obj": "OMIM:605543"}, {"pred": "RO:0002558", "sub": "MONARCH:1f875b902a02caea", "obj": "ECO:0000304"}], "nodes": [{"id": "MONARCH:1f875b902a02caea", "lbl": null}, {"id": "HP:0000738", "lbl": "Hallucinations"}, {"id": "OMIM:605543", "lbl": "Parkinson Disease 4, Autosomal Dominant"}, {"id": "ECO:0000304", "lbl": "traceable author statement used in manual assertion"}]}, "relation": {"deprecated": null, "id": "RO:0002200", "replaced_by": null, "consider": null, "label": "has phenotype", "categories": null, "synonyms": null, "description": null, "types": null}, "publications": null, "type": null, "subject_extension": null, "object": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "HP:0000738", "replaced_by": null, "consider": null, "label": "Hallucinations", "categories": null, "synonyms": null, "description": null, "types": null}, "id": "f0aa8534-7698-43bd-9508-15f0ab9d80c9", "object_extension": null, "subject": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "OMIM:605543", "replaced_by": null, "consider": null, "label": "Parkinson Disease 4, Autosomal Dominant", "categories": null, "synonyms": null, "description": null, "types": null}, "negated": false, "qualifiers": null}, {"evidence_types": null, "slim": null, "provided_by": ["https://data.monarchinitiative.org/ttl/hpoa.ttl"], "evidence_graph": {"edges": [{"pred": "OBAN:association_has_object", "sub": "MONARCH:125e3c726176c0d3", "obj": "HP:0000726"}, {"pred": "OBAN:association_has_subject", "sub": "MONARCH:125e3c726176c0d3", "obj": "OMIM:605543"}, {"pred": "RO:0002558", "sub": "MONARCH:125e3c726176c0d3", "obj": "ECO:0000304"}, {"pred": "RO:0002200", "sub": "OMIM:605543", "obj": "HP:0000726"}], "nodes": [{"id": "OMIM:605543", "lbl": "Parkinson Disease 4, Autosomal Dominant"}, {"id": "ECO:0000304", "lbl": "traceable author statement used in manual assertion"}, {"id": "HP:0000726", "lbl": "Dementia"}, {"id": "MONARCH:125e3c726176c0d3", "lbl": null}]}, "relation": {"deprecated": null, "id": "RO:0002200", "replaced_by": null, "consider": null, "label": "has phenotype", "categories": null, "synonyms": null, "description": null, "types": null}, "publications": null, "type": null, "subject_extension": null, "object": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "HP:0000726", "replaced_by": null, "consider": null, "label": "Dementia", "categories": null, "synonyms": null, "description": null, "types": null}, "id": "e4dbfac5-106a-49b0-8c2f-0b2b705b6914", "object_extension": null, "subject": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "OMIM:605543", "replaced_by": null, "consider": null, "label": "Parkinson Disease 4, Autosomal Dominant", "categories": null, "synonyms": null, "description": null, "types": null}, "negated": false, "qualifiers": null}, {"evidence_types": null, "slim": null, "provided_by": ["https://data.monarchinitiative.org/ttl/hpoa.ttl"], "evidence_graph": {"edges": [{"pred": "RO:0002200", "sub": "OMIM:605543", "obj": "HP:0011999"}, {"pred": "OBAN:association_has_object", "sub": "MONARCH:c8d987bf12fdbfe4", "obj": "HP:0011999"}, {"pred": "RO:0002558", "sub": "MONARCH:c8d987bf12fdbfe4", "obj": "ECO:0000304"}, {"pred": "OBAN:association_has_subject", "sub": "MONARCH:c8d987bf12fdbfe4", "obj": "OMIM:605543"}], "nodes": [{"id": "MONARCH:c8d987bf12fdbfe4", "lbl": null}, {"id": "OMIM:605543", "lbl": "Parkinson Disease 4, Autosomal Dominant"}, {"id": "ECO:0000304", "lbl": "traceable author statement used in manual assertion"}, {"id": "HP:0011999", "lbl": "Paranoia"}]}, "relation": {"deprecated": null, "id": "RO:0002200", "replaced_by": null, "consider": null, "label": "has phenotype", "categories": null, "synonyms": null, "description": null, "types": null}, "publications": null, "type": null, "subject_extension": null, "object": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "HP:0011999", "replaced_by": null, "consider": null, "label": "Paranoia", "categories": null, "synonyms": null, "description": null, "types": null}, "id": "c9593ca8-b396-41d3-88f2-c696fe6aa8f6", "object_extension": null, "subject": {"taxon": {"id": null, "label": null}, "xrefs": null, "deprecated": null, "id": "OMIM:605543", "replaced_by": null, "consider": null, "label": "Parkinson Disease 4, Autosomal Dominant", "categories": null, "synonyms": null, "description": null, "types": null}, "negated": false, "qualifiers": null}], "objects": ["HP:0000726", "HP:0000738", "HP:0001278", "HP:0001300", "HP:0001824", "HP:0002459", "HP:0011999", "HP:0100315"], "numFound": null, "start": null, "facet_counts": {"object_closure": {"HP:0012638": 6, "GO:0008150PHENOTYPE": 4, "NBO:0000313PHENOTYPE": 3, "MP:0003633": 6, "HP:0000707": 7, "HP:0000001": 8, "UPHENO:0001001": 8, "HP:0000118": 8, "BFO:0000002": 8, "BFO:0000031": 8, "IAO:0000300": 8, "IAO:0000144": 8, "GO:0003008PHENOTYPE": 2, "MP:0004924": 3, "MP:0000001": 8, "BFO:0000020": 8, "MP:0003631": 7, "IAO:0000030": 8, "owl:Thing": 8, "MP:0005386": 3, "BFO:0000001": 8, "UBERON:0001016PHENOTYPE": 7, "GO:0007610PHENOTYPE": 3, "HP:0000708": 3, "UPHENO:0001002": 8}, "subject_taxon_label": {}}, "facet_pivot": null}