diff bulk-operations.xml @ 1:66ece4fd024f draft default tip

planemo upload commit 20eeb677e99874173440a365f2db04e315e7ebed
author nathandunn
date Wed, 28 Jun 2017 10:27:08 -0400
parents 028a3ffc17b4
children
line wrap: on
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--- a/bulk-operations.xml	Fri Jun 23 15:04:12 2017 -0400
+++ b/bulk-operations.xml	Wed Jun 28 10:27:08 2017 -0400
@@ -4,17 +4,17 @@
     </macros>
     <expand macro="frontmatter" />
     <command><![CDATA[
-curl --silent -X GET --header 'Accept: application/json' 'http://biolink.planteome.org/apiapi/mart/$association/$object_category/$taxon?rows=$rows&fetch_objects=true' > $output
+curl --silent -X GET --header 'Accept: application/json' 'http://biolink.planteome.org/api/mart/$association/$object_category/$taxon?rows=$rows&fetch_objects=true' > $output
 	]]></command>
     <inputs>
-        <param name="taxon" type="text" format="txt" multiple="false" label="Taxon (e.g. NCBITaxon:9606)"/>
-        <param name="object_category" type="text" format="txt" multiple="false" label="Object Category (e.g. phenotype, disease)"/>
+        <param name="taxon" type="text" format="txt" multiple="false" label="Taxon (e.g. NCBITaxon:4530)"/>
+        <param name="object_category" type="text" format="txt" multiple="false" label="Object Category (e.g. phenotype)"/>
         <param name="association" type="select" multiple="false" display="radio" label="Type">
             <option value="gene">Gene</option>
-            <option value="disease">Disease</option>
-            <option value="case">Case</option>
+            <!--<option value="disease">Disease</option>-->
+            <!--<option value="case">Case</option>-->
         </param>
-        <param name="rows" type="text" format="txt" multiple="false" value="1000" label="Num Rows"/>
+        <param name="rows" type="text" format="txt" multiple="false" value="10" label="Num Rows"/>
     </inputs>
     <expand macro="outputs" />
     <tests>