annotate test-data/genes-for-2-diseases-union.tsv @ 7:61d8060bf2ed draft

planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
author nathandunn
date Mon, 22 Aug 2016 12:41:24 -0400
parents 850bb90bd667
children 5fa1f0ca69cc
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1 NCBIGene:126 ADH1C NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset ECO:0000220 sequencing assay evidence http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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2 NCBIGene:55737 VPS35 NCBITaxon:9606 Homo sapiens OMIM:614203 Parkinson Disease 17 ECO:0000220 sequencing assay evidence PMID:21763483|PMID:18342564|PMID:22991136|PMID:22517097|PMID:22801713 http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl inferred
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3 NCBIGene:3313 HSPA9 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:16565515 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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4 NCBIGene:55532 SLC30A10 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:25149416 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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5 NCBIGene:135138 PACRG NCBITaxon:9606 Homo sapiens OMIM:600116 Parkinson Disease 2, Autosomal Recessive Juvenile PMID:16328510 http://data.monarchinitiative.org/ttl/clinvar.ttl inferred
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6 NCBIGene:3643 INSR NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19276553 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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7 NCBIGene:120892 LRRK2 NCBITaxon:9606 Homo sapiens OMIM:607060 autosomal dominant Parkinson disease 8 ECO:0000220 sequencing assay evidence PMID:16533964|PMID:18704525|PMID:23075850|PMID:21115957|PMID:16728648|PMID:17353388|PMID:9276200|PMID:16003110|PMID:15680455|PMID:15541309|PMID:19020907|PMID:16311269|PMID:15541308|PMID:16003110|PMID:16436782|PMID:17050822|PMID:15929036|PMID:16436781|PMID:16269541|PMID:19020907|PMID:17215492|PMID:18591067|PMID:20008657|PMID:15852371|PMID:17060595|PMID:16401756|PMID:16966502|PMID:15541309|PMID:19667187|PMID:17938369|PMID:15541309|PMID:7898705|PMID:16533964|PMID:15811455|PMID:19283415|PMID:15732108|PMID:15680456|PMID:19308469|PMID:15880653|PMID:16321986|PMID:16157909|PMID:15541309|PMID:18981379|PMID:16240353|PMID:15541308|PMID:17060595|PMID:16269541|PMID:16960813|PMID:16145815|PMID:15680457|PMID:16172858|PMID:15726496 http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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8 NCBIGene:6622 SNCA NCBITaxon:9606 Homo sapiens OMIM:605543 Parkinson Disease 4, Autosomal Dominant ECO:0000220 sequencing assay evidence PMID:17251522|PMID:15159488|PMID:14593171|PMID:14755720|PMID:8285594 http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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9 NCBIGene:2747 GLUD2 NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset PMID:19826450 http://data.monarchinitiative.org/ttl/clinvar.ttl inferred
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10 NCBIGene:4128 MAOA NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:17449559 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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11 NCBIGene:3569 IL6 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:21318773 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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12 NCBIGene:31826 rdgA NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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13 NCBIGene:4803 NGF NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19276553 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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14 NCBIGene:120892 LRRK2 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19915575|PMID:20205471|PMID:25149416|PMID:23628791|PMID:22043175|PMID:23017109|PMID:19915576|PMID:17388990|PMID:23472874 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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15 NCBIGene:5071 PARK2 NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/coriell.ttl inferred
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16 NCBIGene:4137 MAPT NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:20711177|PMID:19915575 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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17 NCBIGene:23317 DNAJC13 NCBITaxon:9606 Homo sapiens OMIM:616361 Parkinson disease 21 ECO:0000220 sequencing assay evidence PMID:24218364 http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl inferred
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18 NCBIGene:55737 VPS35 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:25149416 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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19 NCBIGene:32133 Hsc70-3 NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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20 NCBIGene:7345 UCHL1 NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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21 NCBIGene:4929 NR4A2 NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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22 NCBIGene:54832 VPS13C NCBITaxon:9606 Homo sapiens UMLS:CN202824 Young-onset Parkinson disease ECO:0000322 imported manually asserted information used in automatic assertion http://data.monarchinitiative.org/ttl/orphanet.ttl inferred
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23 NCBIGene:1621 DBH NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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24 NCBIGene:5071 PARK2 NCBITaxon:9606 Homo sapiens UMLS:CN202824 Young-onset Parkinson disease ECO:0000322 imported manually asserted information used in automatic assertion http://data.monarchinitiative.org/ttl/orphanet.ttl inferred
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25 NCBIGene:6888 TALDO1 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:23233872 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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26 NCBIGene:1906 EDN1 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19276553 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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27 NCBIGene:11315 PARK7 NCBITaxon:9606 Homo sapiens OMIM:606324 Parkinson disease 7 ECO:0000220 sequencing assay evidence PMID:16240358|PMID:12446870|PMID:22492997|PMID:12446870|PMID:15365989|PMID:23792957|PMID:12953260|PMID:20639397|PMID:22492997|PMID:20639397|PMID:12953260 http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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28 NCBIGene:38990 Cpr66D NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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29 NCBIGene:65018 PINK1 NCBITaxon:9606 Homo sapiens OMIM:605909 Parkinson Disease 6, Autosomal Recessive Early-Onset ECO:0000220|ECO:0000033 sequencing assay evidence|traceable author statement PMID:24475098|PMID:16966503|PMID:15970950|PMID:21421046|PMID:15349870 http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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30 NCBIGene:25793 FBXO7 NCBITaxon:9606 Homo sapiens OMIM:260300 autosomal recessive early-onset Parkinson disease 15 ECO:0000322|ECO:0000220|ECO:0000033 imported manually asserted information used in automatic assertion|sequencing assay evidence|traceable author statement PMID:18513678|PMID:19038853|PMID:25029497|PMID:19038853|PMID:19038853 http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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31 NCBIGene:23400 ATP13A2 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:25149416|PMID:23628791 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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32 NCBIGene:4137 MAPT NCBITaxon:9606 Homo sapiens UMLS:CN226961 Progressive supranuclear palsy-pure akinesia with gait freezing syndrome ECO:0000322 imported manually asserted information used in automatic assertion http://data.monarchinitiative.org/ttl/orphanet.ttl inferred
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33 NCBIGene:44643 Cnx99A NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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34 NCBIGene:2941 GSTA4 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:16510128 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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35 NCBIGene:11315 PARK7 NCBITaxon:9606 Homo sapiens OMIM:105500 Amyotrophic Lateral Sclerosis-Parkinsonism/Dementia Complex 1 ECO:0000323 imported automatically asserted information used in automatic assertion http://data.monarchinitiative.org/ttl/orphanet.ttl inferred
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36 NCBIGene:2580 GAK NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:20711177 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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37 NCBIGene:2944 GSTM1 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:17449559 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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38 NCBIGene:3630 INS NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19276553 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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39 NCBIGene:39002 Prm NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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40 NCBIGene:627 BDNF NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19276553 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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41 NCBIGene:37853 Mlp60A NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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42 NCBIGene:65018 PINK1 NCBITaxon:9606 Homo sapiens UMLS:CN202824 Young-onset Parkinson disease ECO:0000322 imported manually asserted information used in automatic assertion http://data.monarchinitiative.org/ttl/orphanet.ttl inferred
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43 NCBIGene:4137 MAPT NCBITaxon:9606 Homo sapiens OMIM:260540 Parkinson-Dementia Syndrome ECO:0000220|ECO:0000322 sequencing assay evidence|imported manually asserted information used in automatic assertion http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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44 NCBIGene:4729 NDUFV2 NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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45 NCBIGene:33824 Gpdh NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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46 NCBIGene:53564 retinin NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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47 NCBIGene:26281 FGF20 NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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48 NCBIGene:6311 ATXN2 NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset ECO:0000220 sequencing assay evidence http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl inferred
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49 NCBIGene:6531 SLC6A3 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:9763484|PMID:19590691|PMID:16112329|PMID:16963468 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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50 NCBIGene:1565 CYP2D6 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:15174030|PMID:14991823 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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51 NCBIGene:4217 MAP3K5 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:21815648 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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52 NCBIGene:3077 HFE NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:16824219 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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53 NCBIGene:7345 UCHL1 NCBITaxon:9606 Homo sapiens OMIM:613643 Parkinson disease 5 ECO:0000220 sequencing assay evidence http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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54 NCBIGene:5420 PODXL NCBITaxon:9606 Homo sapiens OMIM:600116 Parkinson Disease 2, Autosomal Recessive Juvenile PMID:26864383 http://data.monarchinitiative.org/ttl/clinvar.ttl inferred
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55 NCBIGene:2203 FBP1 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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56 NCBIGene:1728 NQO1 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:17188257 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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57 NCBIGene:23400 ATP13A2 NCBITaxon:9606 Homo sapiens OMIM:606693 Parkinson disease 9 ECO:0000322|ECO:0000220|ECO:0000220|ECO:0000033 imported manually asserted information used in automatic assertion|sequencing assay evidence|sequencing assay evidence|traceable author statement PMID:21724849|PMID:16964263|PMID:22388936|PMID:16964263|PMID:26633545|PMID:26633545|PMID:495089|PMID:20853184|PMID:21724849|PMID:16964263|PMID:22768177|PMID:22022275|PMID:21094623|PMID:17485642|PMID:22847264|PMID:21724849|PMID:20310007 http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
58 NCBIGene:4137 MAPT NCBITaxon:9606 Homo sapiens UMLS:CN201681 Progressive supranuclear palsy-corticobasal syndrome ECO:0000322 imported manually asserted information used in automatic assertion http://data.monarchinitiative.org/ttl/orphanet.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
59 NCBIGene:27429 HTRA2 NCBITaxon:9606 Homo sapiens OMIM:610297 Parkinson Disease 13, Autosomal Dominant, Susceptibility to ECO:0000220 sequencing assay evidence http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
60 NCBIGene:2950 GSTP1 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:17190945|PMID:23721876 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
0
850bb90bd667 planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
parents:
diff changeset
61 NCBIGene:38508 Cpr64Aa NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
850bb90bd667 planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
parents:
diff changeset
62 NCBIGene:3162 HMOX1 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:21318773 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
7
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
63 NCBIGene:51142 CHCHD2 NCBITaxon:9606 Homo sapiens OMIM:616710 Parkinson disease 22, autosomal dominant ECO:0000220 sequencing assay evidence PMID:26067113|PMID:26067113|PMID:26067113|PMID:25662902|PMID:25662902|PMID:25662902 http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
64 NCBIGene:26058 GIGYF2 NCBITaxon:9606 Homo sapiens OMIM:607688 Parkinson disease 11 ECO:0000220 sequencing assay evidence http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
65 NCBIGene:11315 PARK7 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:23037695|PMID:20800516|PMID:15784737|PMID:23792957|PMID:22898350|PMID:25149416|PMID:20423725|PMID:17010972|PMID:22043175 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
66 NCBIGene:6622 SNCA NCBITaxon:9606 Homo sapiens OMIM:168601 Parkinson disease 1 ECO:0000220 sequencing assay evidence PMID:20437567|PMID:23526723|PMID:17251522|PMID:18852448|PMID:24158904|PMID:9499430|PMID:18852445|PMID:9827625|PMID:14593171|PMID:16358335|PMID:18195271|PMID:10417297|PMID:9197268|PMID:20340137|PMID:24158909|PMID:9462735|PMID:19632874|PMID:17489854|PMID:15451224|PMID:9506559|PMID:15451225|PMID:23427326|PMID:11376188|PMID:14755720|PMID:18704525|PMID:17625105|PMID:11261505|PMID:18852449|PMID:24936070 http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/coriell.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
0
850bb90bd667 planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
parents:
diff changeset
67 NCBIGene:43829 ATPsynbeta NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
7
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
68 MGI:1857323 Up NCBITaxon:10090 Mus musculus DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
69 NCBIGene:6622 SNCA NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19915575|PMID:25064009|PMID:20664293|PMID:17131421|PMID:22043175|PMID:18841091|PMID:12732244|PMID:22355530|PMID:18353766|PMID:19915576|PMID:11535288|PMID:20711177|PMID:18322262|PMID:22110584|PMID:14535945|PMID:12151787|PMID:15099020|PMID:22166454|PMID:17690948|PMID:12885775|PMID:22185909|PMID:21245015|PMID:21892157|PMID:25149416 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
70 NCBIGene:4566 TRNK NCBITaxon:9606 Homo sapiens OMIM:556500 Parkinson disease, mitochondrial PMID:8602753|PMID:7647790|PMID:9674814|PMID:1899320|PMID:1910341|PMID:8513395|PMID:1900002|PMID:17200493|PMID:1334369|PMID:8069655|PMID:1910259|PMID:1848674|PMID:8264702|PMID:10699170|PMID:8447321|PMID:2112427|PMID:9529371|PMID:8170567|PMID:20581069|PMID:1661776|PMID:1678125|PMID:1463005|PMID:1487239|PMID:1324294 http://data.monarchinitiative.org/ttl/clinvar.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
71 NCBIGene:11315 PARK7 NCBITaxon:9606 Homo sapiens UMLS:CN202824 Young-onset Parkinson disease ECO:0000322 imported manually asserted information used in automatic assertion http://data.monarchinitiative.org/ttl/orphanet.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
72 NCBIGene:9627 SNCAIP NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
73 NCBIGene:120892 LRRK2 NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset PMID:27111571 http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/coriell.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
74 NCBIGene:9829 DNAJC6 NCBITaxon:9606 Homo sapiens OMIM:615528 Parkinson Disease 19, Juvenile-Onset ECO:0000220 sequencing assay evidence PMID:22563501|PMID:24220513|PMID:23211418 http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl inferred
0
850bb90bd667 planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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diff changeset
75 NCBIGene:1571 CYP2E1 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:16510128 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
850bb90bd667 planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
parents:
diff changeset
76 NCBIGene:9045 RPL14 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
7
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
77 NCBIGene:7124 TNF NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:21318773 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
78 NCBIGene:2629 GBA NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:25064009|PMID:20947659 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
79 NCBIGene:6622 SNCA NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/coriell.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
80 NCBIGene:4129 MAOB NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:21318773 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
81 NCBIGene:3480 IGF1R NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19276553 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
82 NCBIGene:683 BST1 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19915576 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
83 NCBIGene:4137 MAPT NCBITaxon:9606 Homo sapiens Orphanet:240112 Progressive supranuclear palsy-progressive non-fluent aphasia syndrome ECO:0000322 imported manually asserted information used in automatic assertion http://data.monarchinitiative.org/ttl/orphanet.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
84 NCBIGene:43497 Obp99b NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
85 NCBIGene:2670 GFAP NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19276553 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
86 NCBIGene:6622 SNCA NCBITaxon:9606 Homo sapiens OMIM:260300 autosomal recessive early-onset Parkinson disease 15 ECO:0000322 imported manually asserted information used in automatic assertion http://data.monarchinitiative.org/ttl/orphanet.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
87 NCBIGene:2244 FGB NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:23233872 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
88 NCBIGene:5071 PARK2 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:25149416|PMID:19946270|PMID:15198987|PMID:22043175|PMID:23628791|PMID:15882845|PMID:24582596|PMID:12588799|PMID:17010972|PMID:16573651|PMID:22841634 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
89 NCBIGene:5243 ABCB1 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:20558393 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
90 NCBIGene:4842 NOS1 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:26383258 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
91 NCBIGene:3482 IGF2R NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19276553 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
92 NCBIGene:100129518 LOC100129518 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766|PMID:17188257|PMID:25279756 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
93 NCBIGene:5071 PARK2 NCBITaxon:9606 Homo sapiens OMIM:600116 Parkinson Disease 2, Autosomal Recessive Juvenile ECO:0000220 sequencing assay evidence PMID:12056932|PMID:7565830|PMID:15970950|PMID:11487568|PMID:7565830|PMID:15970950|PMID:11405814|PMID:9802278|PMID:10072423|PMID:9560156|PMID:12056932|PMID:9802278|PMID:16049031|PMID:16130111|PMID:16049031|PMID:10072423|PMID:9634531|PMID:10072423|PMID:9731209|PMID:10939576|PMID:11009195|PMID:9560156|PMID:16476817|PMID:16049031|PMID:12707457|PMID:16049031|PMID:10894217|PMID:14519684|PMID:11487568|PMID:11163284|PMID:16476817|PMID:16130111|PMID:11402119|PMID:9731209|PMID:10894217|PMID:16086186|PMID:16049031|PMID:12056932 http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/coriell.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
94 NCBIGene:199 AIF1 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19276553 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
95 NCBIGene:6202 RPS8 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
96 NCBIGene:6908 TBP NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset ECO:0000220 sequencing assay evidence http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
97 NCBIGene:33883 Cpr NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
98 NCBIGene:54822 TRPM7 NCBITaxon:9606 Homo sapiens OMIM:105500 Amyotrophic Lateral Sclerosis-Parkinsonism/Dementia Complex 1 ECO:0000220|ECO:0000323 sequencing assay evidence|imported automatically asserted information used in automatic assertion http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
99 NCBIGene:65018 PINK1 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:17010972|PMID:21366594|PMID:22043175|PMID:24374061|PMID:25149416 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
100 NCBIGene:1356 CP NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:25758665|PMID:19159062 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
101 NCBIGene:3122 HLA-DRA NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:20711177 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
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102 NCBIGene:8867 SYNJ1 NCBITaxon:9606 Homo sapiens OMIM:615530 Parkinson disease 20, early-onset ECO:0000220 sequencing assay evidence PMID:23804577|PMID:23804563 http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl inferred
0
850bb90bd667 planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
parents:
diff changeset
103 NCBIGene:4099 MAG NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19276553 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
7
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
104 NCBIGene:4137 MAPT NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset ECO:0000220 sequencing assay evidence http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
105 NCBIGene:33721 Rtnl1 NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
106 NCBIGene:39826 fax NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
diff changeset
107 NCBIGene:6571 SLC18A2 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:16112329 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
61d8060bf2ed planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
nathandunn
parents: 0
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108 NCBIGene:8398 PLA2G6 NCBITaxon:9606 Homo sapiens OMIM:612953 Parkinson disease 14 ECO:0000220 sequencing assay evidence PMID:18981035|PMID:20938027|PMID:18570303|PMID:20886109|PMID:18570303|PMID:18570303|PMID:20938027|PMID:18981035|PMID:20938027|PMID:26633545|PMID:21700586 http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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109 NCBIGene:2629 GBA NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset ECO:0000220 sequencing assay evidence http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/coriell.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl inferred
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110 NCBIGene:1981 EIF4G1 NCBITaxon:9606 Homo sapiens OMIM:614251 Parkinson disease 18 ECO:0000220 sequencing assay evidence http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl inferred
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111 NCBIGene:6128 RPL6 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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112 NCBIGene:38418 kst NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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113 NCBIGene:23317 DNAJC13 NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset PMID:24218364 http://data.monarchinitiative.org/ttl/clinvar.ttl inferred
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114 NCBIGene:4535 ND1 NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset PMID:7624338 http://data.monarchinitiative.org/ttl/clinvar.ttl inferred
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115 NCBIGene:43690 chp NCBITaxon:7227 Drosophila melanogaster DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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116 NCBIGene:6147 RPL23A NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:18353766 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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117 NCBIGene:100861548 PINK1-AS NCBITaxon:9606 Homo sapiens OMIM:605909 Parkinson Disease 6, Autosomal Recessive Early-Onset PMID:18685134|PMID:15349871|PMID:15087508|PMID:15955953|PMID:15596610|PMID:15349870|PMID:18524835|PMID:18003639|PMID:15087508|PMID:15349870|PMID:16207731|PMID:15824318|PMID:16207731|PMID:17030667|PMID:18704525|PMID:16769864|PMID:15970950 http://data.monarchinitiative.org/ttl/clinvar.ttl inferred
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118 NCBIGene:1815 DRD4 NCBITaxon:9606 Homo sapiens OMIM:168600 Parkinson Disease, Late-Onset http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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119 NCBIGene:4576 TRNT NCBITaxon:9606 Homo sapiens OMIM:556500 Parkinson disease, mitochondrial http://data.monarchinitiative.org/ttl/kegg.ttl inferred
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120 NCBIGene:3481 IGF2 NCBITaxon:9606 Homo sapiens DOID:14330 Parkinson's disease ECO:0000033 traceable author statement PMID:19276553 http://data.monarchinitiative.org/ttl/ctd.ttl inferred
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121 NCBIGene:6531 SLC6A3 NCBITaxon:9606 Homo sapiens OMIM:613135 Parkinsonism-Dystonia, Infantile ECO:0000220|ECO:0000322 sequencing assay evidence|imported manually asserted information used in automatic assertion PMID:21112253|PMID:22279524|PMID:19478460|PMID:19478460|PMID:21112253|PMID:21112253 http://data.monarchinitiative.org/ttl/orphanet.ttl|http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/kegg.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred