Mercurial > repos > nathandunn > monarchinitiative
annotate test-data/homologues-for-genes-union.tsv @ 0:850bb90bd667 draft
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
| author | nathandunn |
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| date | Sun, 26 Jun 2016 16:00:28 -0400 |
| parents | |
| children | 61d8060bf2ed |
| rev | line source |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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1 NCBIGene:607311 CAPN10 NCBITaxon:9615 Canis lupus familiaris RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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2 NCBIGene:84290 CAPNS2 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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3 ZFIN:ZDB-GENE-030131-5206 capns1b NCBITaxon:7955 Danio rerio RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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4 WormBase:WBGene00006606 tra-3 NCBITaxon:6239 Caenorhabditis elegans RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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5 NCBIGene:6650 calpain 15 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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6 NCBIGene:10753 CAPN9 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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7 NCBIGene:388743 CAPN8 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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8 MGI:1916793 Capns2 NCBITaxon:10090 Mus musculus RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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9 NCBIGene:11131 CAPN11 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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10 NCBIGene:79747 ADGB NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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11 MGI:1344392 Capn10 NCBITaxon:10090 Mus musculus RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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12 NCBIGene:6717 SRI NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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13 NCBIGene:825 calpain 3 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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14 NCBIGene:79747 ADGB NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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15 NCBIGene:823 calpain 1, (mu/I) large subunit NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080|ECO:0000079 phylogenetic evidence|affinity chromatography evidence PMID:26186194 http://data.monarchinitiative.org/ttl/panther.ttl|http://data.monarchinitiative.org/ttl/biogrid.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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16 NCBIGene:6650 calpain 15 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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17 NCBIGene:63834 Capn10 NCBITaxon:10116 Rattus norvegicus RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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18 ZFIN:ZDB-GENE-030113-3 capns1a NCBITaxon:7955 Danio rerio RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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19 NCBIGene:147968 calpain 12 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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20 NCBIGene:553115 PEF1 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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21 NCBIGene:23473 CAPN7 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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22 NCBIGene:147968 calpain 12 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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23 NCBIGene:440854 CAPN14 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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24 NCBIGene:548915 capns2 NCBITaxon:8364 Xenopus tropicalis RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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25 NCBIGene:10753 CAPN9 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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26 NCBIGene:570311 capn10 NCBITaxon:7955 Danio rerio RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000031|ECO:0000080 protein BLAST evidence used in manual assertion|phylogenetic evidence ZFIN:ZDB-PUB-030905-1 http://data.monarchinitiative.org/ttl/panther.ttl|http://data.monarchinitiative.org/ttl/zfin.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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27 NCBIGene:827 CAPN6 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
nathandunn
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28 NCBIGene:553115 PEF1 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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29 NCBIGene:830295 AT5G04170 NCBITaxon:3702 Arabidopsis thaliana RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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30 NCBIGene:826 CAPNS1 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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31 NCBIGene:100022544 CAPN10 NCBITaxon:13616 Monodelphis domestica RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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32 WormBase:WBGene00019770 M04F3.4 NCBITaxon:6239 Caenorhabditis elegans RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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33 NCBIGene:827 CAPN6 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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34 NCBIGene:6717 SRI NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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35 NCBIGene:25801 GCA NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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36 NCBIGene:440854 CAPN14 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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37 NCBIGene:10016 PDCD6 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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850bb90bd667
planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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38 NCBIGene:388743 CAPN8 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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39 NCBIGene:826 CAPNS1 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080|ECO:0000079 phylogenetic evidence|affinity chromatography evidence PMID:26186194 http://data.monarchinitiative.org/ttl/panther.ttl|http://data.monarchinitiative.org/ttl/biogrid.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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40 NCBIGene:25801 GCA NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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41 NCBIGene:824 CAPN2 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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42 NCBIGene:92291 CAPN13 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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43 NCBIGene:716360 CAPN10 NCBITaxon:9544 Macaca mulatta RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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44 NCBIGene:11131 CAPN11 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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45 NCBIGene:841981 DEK1 NCBITaxon:3702 Arabidopsis thaliana RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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46 NCBIGene:820192 AT3G10300 NCBITaxon:3702 Arabidopsis thaliana RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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47 NCBIGene:726 CAPN5 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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48 NCBIGene:23473 CAPN7 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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49 NCBIGene:789674 CAPN10 NCBITaxon:9913 Bos taurus RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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50 NCBIGene:825 calpain 3 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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51 NCBIGene:100145791 capns1 NCBITaxon:8364 Xenopus tropicalis RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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52 NCBIGene:11132 CAPN10 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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53 NCBIGene:100379827 capn10 NCBITaxon:8364 Xenopus tropicalis RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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54 NCBIGene:824 CAPN2 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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55 NCBIGene:726 CAPN5 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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56 NCBIGene:823 calpain 1, (mu/I) large subunit NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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57 NCBIGene:92291 CAPN13 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |
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planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
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58 NCBIGene:10016 PDCD6 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct |