Mercurial > repos > nathandunn > monarchinitiative
comparison test-data/pathways-for-diseases-intersection.tsv @ 9:5fa1f0ca69cc draft default tip
planemo upload commit f59eaefa6c10f425809c7cb6d2e3df6164fa3a15
| author | nathandunn |
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| date | Sun, 25 Sep 2016 21:59:32 -0400 |
| parents | 61d8060bf2ed |
| children |
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| 8:15016fee2bc4 | 9:5fa1f0ca69cc |
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| 1 KEGG-path:map00140 Steroid hormone biosynthesis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 2 KEGG-path:map00830 Retinol metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 3 REACT:116125 Disease RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 4 KEGG-path:map00514 Other types of O-glycan biosynthesis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 5 KEGG-path:map00860 Porphyrin and chlorophyll metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 6 REACT:111102 Signal Transduction RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213|ECO:0000213|ECO:0000213 combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion PMID:21326311|PMID:23406172|PMID:25670933 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 7 KEGG-path:map04080 Neuroactive ligand-receptor interaction RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:24058526 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 8 KEGG-path:map05323 Rheumatoid arthritis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 9 KEGG-path:map00982 Drug metabolism - cytochrome P450 RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 10 KEGG-path:map02010 ABC transporters RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:24058526 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 11 KEGG-path:map04976 Bile secretion RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:24058526 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 12 KEGG-path:map04966 Collecting duct acid secretion RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 13 REACT:111217 Metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213|ECO:0000213 combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion PMID:24058526|PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 1 KEGG-path:map05152 Tuberculosis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | 14 KEGG-path:map05152 Tuberculosis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred |
| 2 REACT:111217 Metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213|ECO:0000213 combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion PMID:24058526|PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | 15 REACT:R-HSA-1989781 PPARA activates gene expression RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000304|ECO:0000213 traceable author statement used in manual assertion|combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/reactome.ttl inferred |
| 16 KEGG-path:map00053 Ascorbate and aldarate metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 3 KEGG-path:map00040 Pentose and glucuronate interconversions RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | 17 KEGG-path:map00040 Pentose and glucuronate interconversions RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred |
| 4 KEGG-path:map00053 Ascorbate and aldarate metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | 18 REACT:71 Gene Expression RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:24058526 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred |
| 5 REACT:R-HSA-1989781 PPARA activates gene expression RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213|ECO:0000304 combinatorial evidence used in automatic assertion|traceable author statement used in manual assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/reactome.ttl inferred | 19 KEGG-path:map00980 Metabolism of xenobiotics by cytochrome P450 RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred |
| 6 KEGG-path:map04976 Bile secretion RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:24058526 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | 20 KEGG-path:map01100 Metabolic pathways RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213|ECO:0000213 combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion PMID:21326311|PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred |
| 7 KEGG-path:map02010 ABC transporters RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:24058526 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | 21 KEGG-path:map04144 Endocytosis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:25670933 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred |
| 8 KEGG-path:map00982 Drug metabolism - cytochrome P450 RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 9 KEGG-path:map05323 Rheumatoid arthritis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 10 KEGG-path:map04966 Collecting duct acid secretion RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 11 REACT:111102 Signal Transduction RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213|ECO:0000213|ECO:0000213 combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion PMID:23406172|PMID:25670933|PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 12 KEGG-path:map00860 Porphyrin and chlorophyll metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 13 KEGG-path:map04080 Neuroactive ligand-receptor interaction RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:24058526 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 14 KEGG-path:map00514 Other types of O-glycan biosynthesis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 15 REACT:116125 Disease RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 16 KEGG-path:map00830 Retinol metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 17 KEGG-path:map00140 Steroid hormone biosynthesis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 18 KEGG-path:map00983 Drug metabolism - other enzymes RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 19 KEGG-path:map05120 Epithelial cell signaling in Helicobacter pylori infection RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 20 KEGG-path:map05110 Vibrio cholerae infection RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 21 KEGG-path:map00190 Oxidative phosphorylation RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 22 KEGG-path:map04142 Lysosome RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 23 KEGG-path:map00500 Starch and sucrose metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 24 KEGG-path:map04740 Olfactory transduction RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:23406172 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | 22 KEGG-path:map04740 Olfactory transduction RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:23406172 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred |
| 25 KEGG-path:map04145 Phagosome RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | 23 KEGG-path:map04145 Phagosome RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred |
| 24 KEGG-path:map00500 Starch and sucrose metabolism RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 25 KEGG-path:map04142 Lysosome RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | |
| 26 REACT:15518 Transmembrane transport of small molecules RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | 26 REACT:15518 Transmembrane transport of small molecules RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred |
| 27 KEGG-path:map04144 Endocytosis RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:25670933 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | 27 KEGG-path:map05120 Epithelial cell signaling in Helicobacter pylori infection RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred |
| 28 KEGG-path:map01100 Metabolic pathways RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213|ECO:0000213 combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion PMID:22558097|PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | 28 KEGG-path:map00983 Drug metabolism - other enzymes RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred |
| 29 KEGG-path:map00980 Metabolism of xenobiotics by cytochrome P450 RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:22558097 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | 29 KEGG-path:map00190 Oxidative phosphorylation RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred |
| 30 REACT:71 Gene Expression RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:24058526 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred | 30 KEGG-path:map05110 Vibrio cholerae infection RO:0002331 involved in OMIM:603903 Sickle Cell Anemia ECO:0000213 combinatorial evidence used in automatic assertion PMID:21326311 http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl inferred |