comparison test-data/homologues-for-genes-union.tsv @ 0:850bb90bd667 draft

planemo upload commit b529f45bf9fecbac1457a65b6b81e3b95200fced
author nathandunn
date Sun, 26 Jun 2016 16:00:28 -0400
parents
children 61d8060bf2ed
comparison
equal deleted inserted replaced
-1:000000000000 0:850bb90bd667
1 NCBIGene:607311 CAPN10 NCBITaxon:9615 Canis lupus familiaris RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
2 NCBIGene:84290 CAPNS2 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
3 ZFIN:ZDB-GENE-030131-5206 capns1b NCBITaxon:7955 Danio rerio RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
4 WormBase:WBGene00006606 tra-3 NCBITaxon:6239 Caenorhabditis elegans RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
5 NCBIGene:6650 calpain 15 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
6 NCBIGene:10753 CAPN9 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
7 NCBIGene:388743 CAPN8 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
8 MGI:1916793 Capns2 NCBITaxon:10090 Mus musculus RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
9 NCBIGene:11131 CAPN11 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
10 NCBIGene:79747 ADGB NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
11 MGI:1344392 Capn10 NCBITaxon:10090 Mus musculus RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
12 NCBIGene:6717 SRI NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
13 NCBIGene:825 calpain 3 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
14 NCBIGene:79747 ADGB NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
15 NCBIGene:823 calpain 1, (mu/I) large subunit NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080|ECO:0000079 phylogenetic evidence|affinity chromatography evidence PMID:26186194 http://data.monarchinitiative.org/ttl/panther.ttl|http://data.monarchinitiative.org/ttl/biogrid.ttl direct
16 NCBIGene:6650 calpain 15 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
17 NCBIGene:63834 Capn10 NCBITaxon:10116 Rattus norvegicus RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
18 ZFIN:ZDB-GENE-030113-3 capns1a NCBITaxon:7955 Danio rerio RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
19 NCBIGene:147968 calpain 12 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
20 NCBIGene:553115 PEF1 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
21 NCBIGene:23473 CAPN7 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
22 NCBIGene:147968 calpain 12 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
23 NCBIGene:440854 CAPN14 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
24 NCBIGene:548915 capns2 NCBITaxon:8364 Xenopus tropicalis RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
25 NCBIGene:10753 CAPN9 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
26 NCBIGene:570311 capn10 NCBITaxon:7955 Danio rerio RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000031|ECO:0000080 protein BLAST evidence used in manual assertion|phylogenetic evidence ZFIN:ZDB-PUB-030905-1 http://data.monarchinitiative.org/ttl/panther.ttl|http://data.monarchinitiative.org/ttl/zfin.ttl direct
27 NCBIGene:827 CAPN6 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
28 NCBIGene:553115 PEF1 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
29 NCBIGene:830295 AT5G04170 NCBITaxon:3702 Arabidopsis thaliana RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
30 NCBIGene:826 CAPNS1 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
31 NCBIGene:100022544 CAPN10 NCBITaxon:13616 Monodelphis domestica RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
32 WormBase:WBGene00019770 M04F3.4 NCBITaxon:6239 Caenorhabditis elegans RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
33 NCBIGene:827 CAPN6 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
34 NCBIGene:6717 SRI NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
35 NCBIGene:25801 GCA NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
36 NCBIGene:440854 CAPN14 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
37 NCBIGene:10016 PDCD6 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
38 NCBIGene:388743 CAPN8 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
39 NCBIGene:826 CAPNS1 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080|ECO:0000079 phylogenetic evidence|affinity chromatography evidence PMID:26186194 http://data.monarchinitiative.org/ttl/panther.ttl|http://data.monarchinitiative.org/ttl/biogrid.ttl direct
40 NCBIGene:25801 GCA NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
41 NCBIGene:824 CAPN2 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
42 NCBIGene:92291 CAPN13 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
43 NCBIGene:716360 CAPN10 NCBITaxon:9544 Macaca mulatta RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
44 NCBIGene:11131 CAPN11 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
45 NCBIGene:841981 DEK1 NCBITaxon:3702 Arabidopsis thaliana RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
46 NCBIGene:820192 AT3G10300 NCBITaxon:3702 Arabidopsis thaliana RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
47 NCBIGene:726 CAPN5 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
48 NCBIGene:23473 CAPN7 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
49 NCBIGene:789674 CAPN10 NCBITaxon:9913 Bos taurus RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
50 NCBIGene:825 calpain 3 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
51 NCBIGene:100145791 capns1 NCBITaxon:8364 Xenopus tropicalis RO:HOM0000017 in orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
52 NCBIGene:11132 CAPN10 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
53 NCBIGene:100379827 capn10 NCBITaxon:8364 Xenopus tropicalis RO:HOM0000020 in 1 to 1 orthology relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
54 NCBIGene:824 CAPN2 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
55 NCBIGene:726 CAPN5 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
56 NCBIGene:823 calpain 1, (mu/I) large subunit NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
57 NCBIGene:92291 CAPN13 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct
58 NCBIGene:10016 PDCD6 NCBITaxon:9606 Homo sapiens RO:HOM0000011 in paralogy relationship with ECO:0000080 phylogenetic evidence http://data.monarchinitiative.org/ttl/panther.ttl direct