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diff test-data/pathways-for-diseases-intersection.tsv @ 2:3107c58d5c85 draft

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planemo upload commit 24de1c1405f1f79859f764da60ba068f2dc88cc6
author nathandunn
date Mon, 27 Jun 2016 09:39:52 -0400
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children 61d8060bf2ed
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/pathways-for-diseases-intersection.tsv	Mon Jun 27 09:39:52 2016 -0400
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+KEGG-path:ko05010	Alzheimer's disease	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko04010	MAPK signaling pathway	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+http://www.reactome.org/PathwayBrowser/#REACT_71	Gene Expression	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko00250	Alanine, aspartate and glutamate metabolism	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko04964	Proximal tubule bicarbonate reclamation	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko04142	Lysosome	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko05218	Melanoma	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko00511	Other glycan degradation	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko01100	Metabolic pathways	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko05016	Huntington's disease	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko00910	Nitrogen metabolism	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko00330	Arginine and proline metabolism	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+http://www.reactome.org/PathwayBrowser/#REACT_6900	Immune System	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko03022	Basal transcription factors	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko00471	D-Glutamine and D-glutamate metabolism	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko00190	Oxidative phosphorylation	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko05200	Pathways in cancer	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko05012	Parkinson's disease	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko00600	Sphingolipid metabolism	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+http://www.reactome.org/PathwayBrowser/#REACT_578	Apoptosis	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko04810	Regulation of actin cytoskeleton	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+http://www.reactome.org/PathwayBrowser/#REACT_111217	Metabolism	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko04722	Neurotrophin signaling pathway	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+http://www.reactome.org/PathwayBrowser/#REACT_111102	Signal Transduction	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+http://www.reactome.org/PathwayBrowser/#REACT_1788	Transcription	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:ko04141	Protein processing in endoplasmic reticulum	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred