Mercurial > repos > nathandunn > monarchinitiative
diff README.rst @ 7:61d8060bf2ed draft
planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
author | nathandunn |
---|---|
date | Mon, 22 Aug 2016 12:41:24 -0400 |
parents | 4be31c7908af |
children | 15016fee2bc4 |
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--- a/README.rst Wed Jun 29 14:17:39 2016 -0400 +++ b/README.rst Mon Aug 22 12:41:24 2016 -0400 @@ -10,3 +10,39 @@ .. .. image:: arguments.png +# To Update + +planemo test + +If one of them fails, then we have to make sure that the different tests are just data being updated, but not an error: + + +should be non-zero. + +For each xml test do: + + planemo test monarch-phenotypes-for-disease.xml --update_test_data + +which will update the test data + +If the test data is non-empty: + + git status | grep modified | cut -c14-1000 | xargs wc -l + +then commit. + + +# Send to the Toolset + +Using this reference for publishing: http://planemo.readthedocs.io/en/latest/publishing.html + + planemo shed_lint --tools + + planemo shed_diff --shed_target toolshed + + planemo shed_update --check_diff --shed_target toolshed + + planemo shed_test --shed_target toolshed + + +