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diff test-data/pathways-for-disease.tsv @ 7:61d8060bf2ed draft

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planemo upload commit cc498cdcd54060998f80018b8f2dc92345adc414
author nathandunn
date Mon, 22 Aug 2016 12:41:24 -0400
parents 3107c58d5c85
children 5fa1f0ca69cc
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--- a/test-data/pathways-for-disease.tsv	Wed Jun 29 14:17:39 2016 -0400
+++ b/test-data/pathways-for-disease.tsv	Mon Aug 22 12:41:24 2016 -0400
@@ -1,99 +1,30 @@
-KEGG-path:ko05010	Alzheimer's disease	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko01100	Metabolic pathways	RO:0002331	involved in	Orphanet:2828	Young-onset Parkinson disease				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04010	MAPK signaling pathway	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_71	Gene Expression	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04120	Ubiquitin mediated proteolysis	RO:0002331	involved in	OMIM:600116	Parkinson Disease 2, Autosomal Recessive Juvenile				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04141	Protein processing in endoplasmic reticulum	RO:0002331	involved in	OMIM:600116	Parkinson Disease 2, Autosomal Recessive Juvenile				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05010	Alzheimer's disease	RO:0002331	involved in	OMIM:556500	Parkinson Disease, Mitochondrial				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05010	Alzheimer's disease	RO:0002331	involved in	OMIM:168601	autosomal dominant Parkinson disease 1				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00591	Linoleic acid metabolism	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00250	Alanine, aspartate and glutamate metabolism	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_11123	Membrane Trafficking	RO:0002331	involved in	OMIM:615528	Parkinson Disease 19, Juvenile-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_17015	Metabolism of proteins	RO:0002331	involved in	OMIM:614251	Parkinson Disease 18, Autosomal Dominant, Susceptibility to				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04964	Proximal tubule bicarbonate reclamation	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00562	Inositol phosphate metabolism	RO:0002331	involved in	OMIM:615530	Parkinson Disease 20, Early-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00970	Aminoacyl-tRNA biosynthesis	RO:0002331	involved in	OMIM:556500	Parkinson Disease, Mitochondrial				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00982	Drug metabolism - cytochrome P450	RO:0002331	involved in	OMIM:556500	Parkinson Disease, Mitochondrial				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04972	Pancreatic secretion	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00590	Arachidonic acid metabolism	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04142	Lysosome	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04724	Glutamatergic synapse	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04370	VEGF signaling pathway	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05218	Melanoma	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05416	Viral myocarditis	RO:0002331	involved in	OMIM:614251	Parkinson Disease 18, Autosomal Dominant, Susceptibility to				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04144	Endocytosis	RO:0002331	involved in	OMIM:615528	Parkinson Disease 19, Juvenile-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_20679	Amine compound SLC transporters	RO:0002331	involved in	OMIM:613135	Parkinsonism-Dystonia, Infantile				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko01100	Metabolic pathways	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00511	Other glycan degradation	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04666	Fc gamma R-mediated phagocytosis	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko01100	Metabolic pathways	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_111102	Signal Transduction	RO:0002331	involved in	OMIM:614203	Parkinson Disease 17				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05016	Huntington's disease	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_111102	Signal Transduction	RO:0002331	involved in	OMIM:614251	Parkinson Disease 18, Autosomal Dominant, Susceptibility to				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00592	alpha-Linolenic acid metabolism	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00564	Glycerophospholipid metabolism	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_15518	Transmembrane transport of small molecules	RO:0002331	involved in	OMIM:613135	Parkinsonism-Dystonia, Infantile				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_71	Gene Expression	RO:0002331	involved in	OMIM:614251	Parkinson Disease 18, Autosomal Dominant, Susceptibility to				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00910	Nitrogen metabolism	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_111217	Metabolism	RO:0002331	involved in	OMIM:605909	Parkinson Disease 6, Autosomal Recessive Early-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00330	Arginine and proline metabolism	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00190	Oxidative phosphorylation	RO:0002331	involved in	OMIM:556500	Parkinson Disease, Mitochondrial				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_21257	Metabolism of RNA	RO:0002331	involved in	OMIM:614251	Parkinson Disease 18, Autosomal Dominant, Susceptibility to				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00350	Tyrosine metabolism	RO:0002331	involved in	OMIM:556500	Parkinson Disease, Mitochondrial				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_6900	Immune System	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko03022	Basal transcription factors	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05012	Parkinson's disease	RO:0002331	involved in	OMIM:168601	autosomal dominant Parkinson disease 1				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_6900	Immune System	RO:0002331	involved in	Orphanet:2828	Young-onset Parkinson disease				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00190	Oxidative phosphorylation	RO:0002331	involved in	Orphanet:2828	Young-onset Parkinson disease				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04120	Ubiquitin mediated proteolysis	RO:0002331	involved in	Orphanet:2828	Young-onset Parkinson disease				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00471	D-Glutamine and D-glutamate metabolism	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04010	MAPK signaling pathway	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04141	Protein processing in endoplasmic reticulum	RO:0002331	involved in	Orphanet:2828	Young-onset Parkinson disease				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04270	Vascular smooth muscle contraction	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00190	Oxidative phosphorylation	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00830	Retinol metabolism	RO:0002331	involved in	OMIM:556500	Parkinson Disease, Mitochondrial				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05145	Toxoplasmosis	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05012	Parkinson's disease	RO:0002331	involved in	OMIM:556500	Parkinson Disease, Mitochondrial				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05012	Parkinson's disease	RO:0002331	involved in	OMIM:607060	autosomal dominant Parkinson disease 8				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05012	Parkinson's disease	RO:0002331	involved in	Orphanet:2828	Young-onset Parkinson disease				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko01100	Metabolic pathways	RO:0002331	involved in	OMIM:556500	Parkinson Disease, Mitochondrial				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05012	Parkinson's disease	RO:0002331	involved in	OMIM:605543	Parkinson Disease 4, Autosomal Dominant				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05200	Pathways in cancer	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04912	GnRH signaling pathway	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_111217	Metabolism	RO:0002331	involved in	OMIM:615530	Parkinson Disease 20, Early-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko01100	Metabolic pathways	RO:0002331	involved in	OMIM:605909	Parkinson Disease 6, Autosomal Recessive Early-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05012	Parkinson's disease	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00600	Sphingolipid metabolism	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00565	Ether lipid metabolism	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_578	Apoptosis	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04730	Long-term depression	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04975	Fat digestion and absorption	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_6900	Immune System	RO:0002331	involved in	OMIM:614251	Parkinson Disease 18, Autosomal Dominant, Susceptibility to				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05012	Parkinson's disease	RO:0002331	involved in	OMIM:613135	Parkinsonism-Dystonia, Infantile				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_111217	Metabolism	RO:0002331	involved in	OMIM:556500	Parkinson Disease, Mitochondrial				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04810	Regulation of actin cytoskeleton	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00190	Oxidative phosphorylation	RO:0002331	involved in	OMIM:605909	Parkinson Disease 6, Autosomal Recessive Early-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05012	Parkinson's disease	RO:0002331	involved in	OMIM:605909	Parkinson Disease 6, Autosomal Recessive Early-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_111217	Metabolism	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_111217	Metabolism	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko01100	Metabolic pathways	RO:0002331	involved in	OMIM:615530	Parkinson Disease 20, Early-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_111217	Metabolism	RO:0002331	involved in	Orphanet:2828	Young-onset Parkinson disease				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04722	Neurotrophin signaling pathway	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_111102	Signal Transduction	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_1762	3' -UTR-mediated translational regulation	RO:0002331	involved in	OMIM:614251	Parkinson Disease 18, Autosomal Dominant, Susceptibility to				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05012	Parkinson's disease	RO:0002331	involved in	OMIM:610297	Parkinson Disease 13, Autosomal Dominant, Susceptibility to				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05012	Parkinson's disease	RO:0002331	involved in	OMIM:613643	Parkinson Disease 5, Autosomal Dominant, Susceptibility to				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04664	Fc epsilon RI signaling pathway	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04070	Phosphatidylinositol signaling system	RO:0002331	involved in	OMIM:615530	Parkinson Disease 20, Early-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05012	Parkinson's disease	RO:0002331	involved in	OMIM:606324	Parkinson Disease 7, Autosomal Recessive Early-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_6900	Immune System	RO:0002331	involved in	OMIM:600116	Parkinson Disease 2, Autosomal Recessive Juvenile				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05010	Alzheimer's disease	RO:0002331	involved in	OMIM:605543	Parkinson Disease 4, Autosomal Dominant				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_1788	Transcription	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05016	Huntington's disease	RO:0002331	involved in	OMIM:556500	Parkinson Disease, Mitochondrial				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00010	Glycolysis / Gluconeogenesis	RO:0002331	involved in	OMIM:556500	Parkinson Disease, Mitochondrial				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-http://www.reactome.org/PathwayBrowser/#REACT_6900	Immune System	RO:0002331	involved in	OMIM:612953	Parkinson Disease 14, Autosomal Recessive				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00071	Fatty acid degradation	RO:0002331	involved in	OMIM:556500	Parkinson Disease, Mitochondrial				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko03013	RNA transport	RO:0002331	involved in	OMIM:614251	Parkinson Disease 18, Autosomal Dominant, Susceptibility to				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko05012	Parkinson's disease	RO:0002331	involved in	OMIM:600116	Parkinson Disease 2, Autosomal Recessive Juvenile				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko00980	Metabolism of xenobiotics by cytochrome P450	RO:0002331	involved in	OMIM:556500	Parkinson Disease, Mitochondrial				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
-KEGG-path:ko04141	Protein processing in endoplasmic reticulum	RO:0002331	involved in	OMIM:168600	Parkinson Disease, Late-Onset				http://data.monarchinitiative.org/ttl/omim.ttl|http://data.monarchinitiative.org/ttl/clinvar.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map05152	Tuberculosis	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:21326311	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+REACT:111217	Metabolism	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213|ECO:0000213	combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion	PMID:24058526|PMID:22558097	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map00040	Pentose and glucuronate interconversions	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:22558097	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map00053	Ascorbate and aldarate metabolism	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:22558097	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+REACT:R-HSA-1989781	PPARA activates gene expression	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213|ECO:0000304	combinatorial evidence used in automatic assertion|traceable author statement used in manual assertion	PMID:22558097	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/reactome.ttl	inferred
+KEGG-path:map04976	Bile secretion	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:24058526	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map02010	ABC transporters	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:24058526	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map00982	Drug metabolism - cytochrome P450	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:22558097	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map05323	Rheumatoid arthritis	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:21326311	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map04966	Collecting duct acid secretion	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:21326311	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+REACT:111102	Signal Transduction	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213|ECO:0000213|ECO:0000213	combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion	PMID:23406172|PMID:25670933|PMID:21326311	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map00860	Porphyrin and chlorophyll metabolism	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:22558097	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map04080	Neuroactive ligand-receptor interaction	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:24058526	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map00514	Other types of O-glycan biosynthesis	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:22558097	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+REACT:116125	Disease	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:21326311	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map00830	Retinol metabolism	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:22558097	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map00140	Steroid hormone biosynthesis	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:22558097	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map00983	Drug metabolism - other enzymes	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:22558097	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map05120	Epithelial cell signaling in Helicobacter pylori infection	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:21326311	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map05110	Vibrio cholerae infection	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:21326311	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map00190	Oxidative phosphorylation	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:21326311	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map04142	Lysosome	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:21326311	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map00500	Starch and sucrose metabolism	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:22558097	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map04740	Olfactory transduction	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:23406172	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map04145	Phagosome	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:21326311	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+REACT:15518	Transmembrane transport of small molecules	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:21326311	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map04144	Endocytosis	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:25670933	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map01100	Metabolic pathways	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213|ECO:0000213	combinatorial evidence used in automatic assertion|combinatorial evidence used in automatic assertion	PMID:22558097|PMID:21326311	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+KEGG-path:map00980	Metabolism of xenobiotics by cytochrome P450	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:22558097	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred
+REACT:71	Gene Expression	RO:0002331	involved in	OMIM:603903	Sickle Cell Anemia	ECO:0000213	combinatorial evidence used in automatic assertion	PMID:24058526	http://data.monarchinitiative.org/ttl/gwascatalog.ttl|http://data.monarchinitiative.org/ttl/ctd.ttl	inferred