Mercurial > repos > ngsplot > ngsplot
comparison ngsplot_galaxytoolshed_v1.0/ngsplot_intro/intro.xml @ 6:664fbd8919f3 draft
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author | ngsplot |
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date | Thu, 19 Mar 2015 17:18:09 -0400 |
parents | b2d5006b82b8 |
children | c3c019ccc5b0 |
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5:5621523bbe56 | 6:664fbd8919f3 |
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1 <tool id="ngs.plot_intro" name="Introduction"> | 1 <tool id="ngs.plot_intro" name="Introduction"> |
2 <command interpreter="perl"> | 2 <command interpreter="perl"> |
3 | 3 |
4 </command> | 4 </command> |
5 | |
6 #if $numsamples.numsamples2 == "1": | |
7 runNGSplot.pl | |
8 $genome_name | |
9 | |
10 #else if $numsamples.numsamples2 == "5": | |
11 runNGSplot.pl | |
12 $genome_name | |
13 | |
14 #end if: | |
15 | 5 |
16 <!-- | 6 <!-- |
17 <inputs> | 7 <inputs> |
18 <param type="text" value="mm9" name="genome_name" label="Intro Text here..." help="" > | 8 <param type="text" value="mm9" name="genome_name" label="Intro Text here..." help="" > |
19 </param> | 9 </param> |
54 | 44 |
55 **CONTACT** | 45 **CONTACT** |
56 | 46 |
57 ngs.plot is developed by Drs. Li Shen, Ningyi Shao and Xiaochuan Liu at the Icahn School of Medicine at Mount Sinai. If you have technical questions about ngs.plot, please use the discussion forum. For collaborations or any other matters, use: li.shen AT mssm.edu. | 47 ngs.plot is developed by Drs. Li Shen, Ningyi Shao and Xiaochuan Liu at the Icahn School of Medicine at Mount Sinai. If you have technical questions about ngs.plot, please use the discussion forum. For collaborations or any other matters, use: li.shen AT mssm.edu. |
58 | 48 |
49 ----- | |
50 | |
51 **Galaxy Toolshed Installation | |
52 | |
53 Please note that the Galaxy Toolshed implementation of ngs.plot requires ngs.plot v2.47.1 to be already installed on your system. For instructions on the system installation of ngs.plot, please see https://code.google.com/p/ngsplot/. | |
54 | |
59 </help> | 55 </help> |
60 <outputs> | 56 <outputs> |
61 <!-- | |
62 <data format="pdf" name="out_avg_png" /> | |
63 <data format="pdf" name="out_hm_png" /> | |
64 <data format="zip" name="out_zip"/> | |
65 --> | |
66 </outputs> | 57 </outputs> |
67 </tool> | 58 </tool> |