Mercurial > repos > nick > allele_counts

annotate tests/real-mit-s.csv.out @ 11:cf2af5c3118c draft default tip

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"planemo upload for repository https://github.com/galaxyproject/dunovo commit ac9577f0047ad984b307fe2c4b40e2eb45a0e6e2"
author nick
date Fri, 03 Apr 2020 16:05:04 -0400
parents 411adeff1eec
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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8
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
1 #SAMPLE CHR POS +A +C +G +T -A -C -G -T CVRG ALLELES MAJOR MINOR MAF BIAS
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
2 S1 chrM 2000 1 9095 1 0 7 5808 0 1 14913 1 C A 0.00054 2.03879
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
3 S3 chrM 2000 0 7933 0 4 10 5242 1 2 13192 1 C A 0.00076 2.51047
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
4 S1 chrM 3000 17399 7 22 8 10567 35 22 4 28064 0 A G 0.00157 0.51868
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
5 S2 chrM 3000 12535 3 24 2 7937 13 12 2 20528 1 A G 0.00175 0.22864
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
6 S3 chrM 3000 18981 7 29 6 11286 33 17 4 30363 0 A G 0.00152 0.01416
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
7 S4 chrM 3000 9254 1 15 2 6240 16 14 1 15543 0 A G 0.00187 0.33202
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
8 S1 chrM 4000 6134 2 1 3 6124 1 1 1 12267 1 A T 0.00033 0.99804
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
9 S1 chrM 7000 0 17 1 6216 4 9 2 7529 13778 0 T C 0.00189 0.81221
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
10 S2 chrM 7000 0 7 2 5104 0 9 4 6288 11414 1 T C 0.0014 0.04254
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
11 S3 chrM 7000 0 9 0 6446 4 4 10 7506 13979 1 T C 0.00093 0.92561
411adeff1eec Handle "." sample columns, update tests to work with BIAS column.
nick
parents: 5
diff changeset
12 S3 chrM 8000 3 1 5023 1 1 0 5043 2 10074 1 G A 0.0004 1.00358