Mercurial > repos > nick > allele_counts
diff tests/artificial-samples.csv.out @ 5:31361191d2d2
Uploaded tarball.
Version 1.1: Stranded output, slightly different handling of minor allele ties and 0 coverage sites, revised help text, added test datasets.
| author | nick |
|---|---|
| date | Thu, 12 Sep 2013 11:34:23 -0400 |
| parents | |
| children | 411adeff1eec |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tests/artificial-samples.csv.out Thu Sep 12 11:34:23 2013 -0400 @@ -0,0 +1,13 @@ +BRAIN chr1 0 30 0 0 0 30 1 A . 0.0 +ARTERY chr1 0 0 0 30 0 30 1 G . 0.0 +THYROID chr1 0 0 30 0 0 30 1 C . 0.0 +BRAIN chr1 10 30 0 0 0 30 1 A . 0.0 +ARTERY chr1 10 30 0 2 0 32 1 A G 0.0625 +THYROID chr1 10 31 0 1 0 32 1 A G 0.03125 +BRAIN chr1 20 30 0 2 0 32 1 A G 0.0625 +ARTERY chr1 20 34 0 6 0 40 2 A G 0.15 +THYROID chr1 20 30 0 2 0 32 0 A G 0.0625 +BRAIN chr1 30 30 0 0 0 30 1 A . 0.0 +BRAIN chr1 40 0 0 0 30 30 1 T . 0.0 +ARTERY chr1 40 1 0 2 97 100 0 T G 0.02 +THYROID chr1 40 0 69 0 31 100 0 C T 0.31