Mercurial > repos > nick > dunovo
comparison tool_dependencies.xml @ 6:23f5d9316694 draft
Bugfix in kalign for very diverse read lengths.
| author | nick |
|---|---|
| date | Thu, 02 Nov 2017 16:24:48 -0400 |
| parents | 5fbeaa41b223 |
| children | e7b88ffb8294 |
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| 5:000969829a5d | 6:23f5d9316694 |
|---|---|
| 7 <repository changeset_revision="1409782220c9" name="package_samtools_0_1_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> | 7 <repository changeset_revision="1409782220c9" name="package_samtools_0_1_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> |
| 8 </package> | 8 </package> |
| 9 <package name="mafft" version="7.221"> | 9 <package name="mafft" version="7.221"> |
| 10 <repository changeset_revision="15974dd17515" name="mafft" owner="rnateam" toolshed="https://toolshed.g2.bx.psu.edu" /> | 10 <repository changeset_revision="15974dd17515" name="mafft" owner="rnateam" toolshed="https://toolshed.g2.bx.psu.edu" /> |
| 11 </package> | 11 </package> |
| 12 <package name="networkx" version="1.11"> | 12 <package name="networkx" version="1.10"> |
| 13 <repository changeset_revision="e761775277c1" name="package_networkx_1_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> | 13 <repository changeset_revision="e761775277c1" name="package_networkx_1_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> |
| 14 </package> | 14 </package> |
| 15 <package name="dunovo" version="2.0.6"> | 15 <package name="dunovo" version="2.0.8"> |
| 16 <install version="1.0"> | 16 <install version="1.0"> |
| 17 <actions> | 17 <actions> |
| 18 <action sha256sum="3d628d297767f9836ab57ef738b2b29f588c36df8c43ec6814ea97e29da1d5ec" type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v2.0.6.tar.gz</action> | 18 <action sha256sum="4c105e29eff271b9e32f12c5d2862b717ba960981f4820dae26e159e2a0ed33d" type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v2.0.8.tar.gz</action> |
| 19 <action type="shell_command">make</action> | 19 <action type="shell_command">make</action> |
| 20 <action type="move_directory_files"> | 20 <action type="move_directory_files"> |
| 21 <source_directory>.</source_directory> | 21 <source_directory>.</source_directory> |
| 22 <destination_directory>$INSTALL_DIR</destination_directory> | 22 <destination_directory>$INSTALL_DIR</destination_directory> |
| 23 </action> | 23 </action> |