Mercurial > repos > nick > dunovo
comparison correct_barcodes.xml @ 1:ea832c221ec9 draft
planemo upload for repository https://github.com/galaxyproject/dunovo commit b'd25c300643f4f204b4a9445b8eac071b2d127520\n'-dirty
| author | nick |
|---|---|
| date | Fri, 24 Feb 2017 03:18:01 -0500 |
| parents | f875256c722e |
| children | a9cb6fb9ea94 |
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| 0:f875256c722e | 1:ea832c221ec9 |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool id="correct_barcodes" name="Du Novo: Correct barcodes" version="0.7"> | 2 <tool id="correct_barcodes" name="Du Novo: Correct barcodes" version="0.7"> |
| 3 <description>of duplex sequencing reads</description> | 3 <description>of duplex sequencing reads</description> |
| 4 <requirements> | 4 <requirements> |
| 5 <requirement type="package" version="2.1.0">bowtie2</requirement> | 5 <requirement type="package" version="2.2.5">bowtie2</requirement> |
| 6 <requirement type="package" version="0.1.18">samtools</requirement> | 6 <requirement type="package" version="0.1.18">samtools</requirement> |
| 7 <requirement type="package" version="1.9">networkx</requirement> | 7 <requirement type="package" version="1.9">networkx</requirement> |
| 8 <requirement type="package" version="0.7">dunovo</requirement> | 8 <requirement type="package" version="0.7.1">dunovo</requirement> |
| 9 <!-- TODO: require Python 2.7 --> | 9 <!-- TODO: require Python 2.7 --> |
| 10 </requirements> | 10 </requirements> |
| 11 <command detect_errors="exit_code">correct-barcodes.sh -d $dist -m $mapq -p $pos '$input' > '$output' | 11 <command detect_errors="exit_code">correct-barcodes.sh -d $dist -m $mapq -p $pos '$input' > '$output' |
| 12 </command> | 12 </command> |
| 13 <inputs> | 13 <inputs> |