Mercurial > repos > nick > duplex
comparison duplex.xml @ 1:b63d6673f883 draft
Bump version number and install from a stable, tagged Github release.
author | nick |
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date | Mon, 23 Nov 2015 22:53:35 -0500 |
parents | d2e46adc199e |
children | ba2a53b970ca |
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0:d2e46adc199e | 1:b63d6673f883 |
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1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
2 <tool id="duplex" name="Make consensus reads" version="0.1"> | 2 <tool id="duplex" name="Make consensus reads" version="0.2"> |
3 <description>from duplex sequencing data</description> | 3 <description>from duplex sequencing data</description> |
4 <requirements> | 4 <requirements> |
5 <requirement type="package" version="0.1">duplex</requirement> | 5 <requirement type="package" version="0.2">duplex</requirement> |
6 <requirement type="set_environment">DUPLEX_DIR</requirement> | 6 <requirement type="set_environment">DUPLEX_DIR</requirement> |
7 </requirements> | 7 </requirements> |
8 <command detect_errors="exit_code"><![CDATA[ | 8 <command detect_errors="exit_code"><![CDATA[ |
9 python \$DUPLEX_DIR/duplex.py -r $min_reads -q $qual_thres -F $qual_format $input | 9 python \$DUPLEX_DIR/duplex.py -r $min_reads -q $qual_thres -F $qual_format $input |
10 #if $keep_sscs: | 10 #if $keep_sscs: |