Mercurial > repos > nick > duplex
comparison tool_dependencies.xml @ 6:9a0bee12b583 draft default tip
planemo upload for repository https://github.com/galaxyproject/dunovo commit b'9fbe4b8871038d2945fa4b9ee0b5f89cf4e4f494\n'-dirty
| author | nick |
|---|---|
| date | Mon, 06 Feb 2017 23:39:11 -0500 |
| parents | 4bc49a5769ee |
| children |
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| 5:4bc49a5769ee | 6:9a0bee12b583 |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="bowtie2" version="2.1.0"> | |
| 4 <repository changeset_revision="017a00c265f1" name="package_bowtie2_2_1_0" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" /> | |
| 5 </package> | |
| 6 <package name="samtools" version="0.1.18"> | |
| 7 <repository changeset_revision="1409782220c9" name="package_samtools_0_1_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> | |
| 8 </package> | |
| 3 <package name="mafft" version="7.221"> | 9 <package name="mafft" version="7.221"> |
| 4 <repository changeset_revision="15974dd17515" name="mafft" owner="rnateam" toolshed="https://toolshed.g2.bx.psu.edu" /> | 10 <repository changeset_revision="15974dd17515" name="mafft" owner="rnateam" toolshed="https://toolshed.g2.bx.psu.edu" /> |
| 5 </package> | 11 </package> |
| 6 <package name="duplex" version="0.5"> | 12 <package name="networkx" version="1.9"> |
| 13 <repository changeset_revision="83df321ad85e" name="package_networkx_1_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> | |
| 14 </package> | |
| 15 <package name="duplex" version="0.6"> | |
| 7 <install version="1.0"> | 16 <install version="1.0"> |
| 8 <actions> | 17 <actions> |
| 9 <action type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v0.5.tar.gz</action> | 18 <action sha256sum="a3cc378c22fcfc3bcaa11129f27f61bab5ff51cc9185320d53ece273b56e6214" type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v0.6.tar.gz</action> |
| 10 <action type="shell_command">make</action> | 19 <action type="shell_command">make</action> |
| 11 <action type="move_directory_files"> | 20 <action type="move_directory_files"> |
| 12 <source_directory>.</source_directory> | 21 <source_directory>.</source_directory> |
| 13 <destination_directory>$INSTALL_DIR</destination_directory> | 22 <destination_directory>$INSTALL_DIR</destination_directory> |
| 14 </action> | 23 </action> |