Mercurial > repos > nick > duplex
diff make_families.xml @ 2:ba2a53b970ca draft
planemo upload commit 670b3282d2c120882b956ad617e61369467fb0fe
author | nick |
---|---|
date | Tue, 24 Nov 2015 21:22:29 -0500 |
parents | b63d6673f883 |
children | 7f513b9b1b1e |
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--- a/make_families.xml Mon Nov 23 22:53:35 2015 -0500 +++ b/make_families.xml Tue Nov 24 21:22:29 2015 -0500 @@ -1,10 +1,11 @@ <?xml version="1.0"?> -<tool id="make_families" name="Make families" version="0.2"> - <description>from duplex sequencing data</description> +<tool id="make_families" name="Du Novo: Make families" version="0.2"> + <description>of duplex sequencing reads</description> <requirements> <requirement type="package" version="0.2">duplex</requirement> <requirement type="set_environment">DUPLEX_DIR</requirement> </requirements> + <!-- TODO: Add dependency on coreutils to get paste? --> <command>paste $fastq1 $fastq2 | paste - - - - | awk -f \$DUPLEX_DIR/make-barcodes.awk -v TAG_LEN=$taglen -v INVARIANT=$invariant