Mercurial > repos > nilesh > rseqc
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rseqc commit d7544582d5599c67a284faf9232cd2ccc4daa1de
author | iuc |
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date | Tue, 09 Apr 2024 11:24:55 +0000 |
parents | f242ee103277 |
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38 | 1 == RSeQC Galaxy Wrapper == |
2 | |
3 This is a Galaxy wrapper for the RSeQC RNA-Seq QC package. | |
4 | |
5 ** Installation ** | |
6 | |
7 Installation from a tool shed provides the necessary tool dependencies, R, numpy, and RSeQC. | |
8 | |
9 Otherwise, make sure that R and the RSeQC scripts are in the path and run under the Galaxy environment. | |
10 Move the xml files to a subdirectory of your tools directory and add lines in tool_conf.xml to point to them. | |
11 Restart the Galaxy server. | |
12 | |
13 Requires Python 2.7 | |
14 | |
15 ** Attribution ** | |
16 | |
17 The RSeQC package and associated documentation can be found at: http://rseqc.sourceforge.net/ | |
18 | |
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f242ee103277
planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/rseqc commit 91ad241aa3f34b70649d13a5f18611da7577a5ee
lparsons
parents:
38
diff
changeset
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19 The galaxy wrapper code was written by |
38 | 20 Nilesh Kavthekar, School of Engineering and Applied Sciences, University of Pennsylvania, Class of 2016 |
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f242ee103277
planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/rseqc commit 91ad241aa3f34b70649d13a5f18611da7577a5ee
lparsons
parents:
38
diff
changeset
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21 Modified by |
38 | 22 Lance Parsons, Lewis-Sigler Institute for Integrative Genomics, Princeton University, |
23 Bjorn Gruning, University of Freiburg, bjoern.gruening@gmail.com |