Mercurial > repos > nilesh > rseqc
comparison FPKM_count.xml @ 59:dbedfc5f5a3c draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rseqc commit 247059e2527b66f1dbecf1e61496daef921040c3"
author | iuc |
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date | Sat, 18 Dec 2021 19:41:19 +0000 |
parents | 5873cd7afb67 |
children | 1421603cc95b |
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58:1a052c827e88 | 59:dbedfc5f5a3c |
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1 <tool id="rseqc_FPKM_count" name="FPKM Count" version="@WRAPPER_VERSION@.1"> | 1 <tool id="rseqc_FPKM_count" name="FPKM Count" version="@TOOL_VERSION@.1"> |
2 <description>calculates raw read count, FPM, and FPKM for each gene</description> | 2 <description>calculates raw read count, FPM, and FPKM for each gene</description> |
3 | 3 <expand macro="bio_tools"/> |
4 <macros> | 4 <macros> |
5 <import>rseqc_macros.xml</import> | 5 <import>rseqc_macros.xml</import> |
6 </macros> | 6 </macros> |
7 | 7 |
8 <expand macro="requirements" /> | 8 <expand macro="requirements" /> |
59 </outputs> | 59 </outputs> |
60 | 60 |
61 <tests> | 61 <tests> |
62 <test> | 62 <test> |
63 <param name="input" value="pairend_strandspecific_51mer_hg19_chr1_1-100000.bam"/> | 63 <param name="input" value="pairend_strandspecific_51mer_hg19_chr1_1-100000.bam"/> |
64 <param name="refgene" value="hg19_RefSeq_chr1_1-100000.bed"/> | 64 <param name="refgene" value="hg19_RefSeq_chr1_1-100000.bed" ftype="bed12"/> |
65 <output name="outputxls" file="output.FPKM.xls"/> | 65 <output name="outputxls" file="output.FPKM.xls"/> |
66 </test> | 66 </test> |
67 </tests> | 67 </tests> |
68 | 68 |
69 <help><![CDATA[ | 69 <help><![CDATA[ |