diff inner_distance.xml @ 61:5968573462fa draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rseqc commit 8a91236cee4d408ae2b53a3e9b6daebc332d631a

--- a/inner_distance.xml	Sat Nov 26 15:19:14 2022 +0000
+++ b/inner_distance.xml	Sat Dec 10 11:23:05 2022 +0000
@@ -1,10 +1,11 @@
 <tool id="rseqc_inner_distance" name="Inner Distance" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@GALAXY_VERSION@">
     <description>calculate the inner distance (or insert size) between two paired RNA reads</description>
-    <expand macro="bio_tools"/>
     <macros>
         <import>rseqc_macros.xml</import>
     </macros>
 
+    <expand macro="bio_tools"/>
+
     <expand macro="requirements" />
 
     <expand macro="stdio" />
@@ -34,10 +35,10 @@
     </inputs>
 
     <outputs>
-        <expand macro="pdf_output_data" filename="output.inner_distance_plot.pdf" />
-        <data format="txt" name="outputtxt" from_work_dir="output.inner_distance.txt" label="${tool.name} on ${on_string} (text)"/>
-        <data format="txt" name="outputfreqtxt" from_work_dir="output.inner_distance_freq.txt" label="${tool.name} on ${on_string} (frequency text)" />
-        <expand macro="rscript_output_data" filename="output.inner_distance_plot.r" />
+        <expand macro="pdf_output_data" filename="output.inner_distance_plot.pdf" label="${tool.name} on ${on_string}: plot (PDF)"/>
+        <data format="txt" name="outputtxt" from_work_dir="output.inner_distance.txt" label="${tool.name} on ${on_string}: TXT"/>
+        <data format="txt" name="outputfreqtxt" from_work_dir="output.inner_distance_freq.txt" label="${tool.name} on ${on_string}: frequency (TXT)" />
+        <expand macro="rscript_output_data" filename="output.inner_distance_plot.r"  label="${tool.name} on ${on_string}: Rscript"/>
     </outputs>
 
     <tests>