diff test-data/output.junctionSaturation_plot_r @ 59:dbedfc5f5a3c draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rseqc commit 247059e2527b66f1dbecf1e61496daef921040c3"

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/output.junctionSaturation_plot_r	Sat Dec 18 19:41:19 2021 +0000
@@ -0,0 +1,12 @@
+pdf('output.junctionSaturation_plot.pdf')
+x=c(5,10,15,20,25,30,35,40,45,50,55,60,65,70,75,80,85,90,95,100)
+y=c(0,0,0,0,0,0,1,1,1,1,1,1,1,1,1,1,1,1,1,1)
+z=c(0,0,0,0,0,0,1,1,1,1,1,1,1,2,2,2,2,2,2,3)
+w=c(0,0,0,0,0,0,0,0,0,0,0,0,0,1,1,1,1,1,1,2)
+m=max(0,0,0)
+n=min(0,0,0)
+plot(x,z/1000,xlab='percent of total reads',ylab='Number of splicing junctions (x1000)',type='o',col='blue',ylim=c(n,m))
+points(x,y/1000,type='o',col='red')
+points(x,w/1000,type='o',col='green')
+legend(5,0, legend=c("All junctions","known junctions", "novel junctions"),col=c("blue","red","green"),lwd=1,pch=1)
+dev.off()