Mercurial > repos > nilesh > sickle
comparison sickle.xml @ 4:98e35d7ce5c9
sickle now refers to zlib in its own directory
| author | nilesh |
|---|---|
| date | Fri, 12 Jul 2013 13:49:15 -0500 |
| parents | 8d697edc2f55 |
| children | c6a790326d1e |
comparison
equal
deleted
inserted
replaced
| 3:8d697edc2f55 | 4:98e35d7ce5c9 |
|---|---|
| 1 <tool id="sickle" name="Sickle"> | 1 <tool id="sickle" name="Sickle"> |
| 2 <description>Windowed Adaptive Trimming of FastQ data</description> | 2 <description>Windowed Adaptive Trimming of FastQ data</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="1.2.8">zlib</requirement> | 4 <requirement type="package" version="1.2.8">zlib</requirement> |
| 5 <requirement type="package" version="1.2.8">sickle</requirement> | 5 <requirement type="package" version="1.21.0">sickle</requirement> |
| 6 </requirements> | 6 </requirements> |
| 7 <command> | 7 <command> |
| 8 sickle $readtype.single_or_paired --quiet | 8 sickle $readtype.single_or_paired --quiet |
| 9 | 9 |
| 10 #if str($readtype.single_or_paired) == "se": | 10 #if str($readtype.single_or_paired) == "se": |