Mercurial > repos > nml > bio_hansel
changeset 9:4654c51dae72 draft default tip
planemo upload for repository https://github.com/phac-nml/bio_hansel commit a7add3a4ffc9275f78d4583aac1ef3281c0def21
| author | nml |
|---|---|
| date | Wed, 09 May 2018 15:06:32 -0400 |
| parents | e9fd173fc7ee |
| children | |
| files | bio_hansel.xml test-data/SRR1002850_SMALL.fasta-match_results.tab test-data/SRR1002850_SMALL.fasta-results.tab test-data/SRR1002850_SMALL.fasta-tech_results.tab test-data/SRR5646583_SMALL-match_results.tab test-data/SRR5646583_SMALL-results.tab test-data/SRR5646583_SMALL-tech_results.tab test-data/match_results.tab test-data/results.tab test-data/tech_results.tab |
| diffstat | 10 files changed, 732 insertions(+), 487 deletions(-) [+] |
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--- a/bio_hansel.xml Fri Apr 20 10:44:35 2018 -0400 +++ b/bio_hansel.xml Wed May 09 15:06:32 2018 -0400 @@ -1,227 +1,296 @@ -<tool id="bio_hansel" name="Bio Hansel" version="1.3.1"> - <description>SNV Subtyping with genome assemblies or reads</description> - <requirements> - <requirement type="package" version="1.3.1">bio_hansel</requirement> - <requirement type="package" version="17.2.0">attrs</requirement> - </requirements> - <command detect_errors="exit_code"><![CDATA[ - ## Preparing file input. - #if $data_type.type == "paired": +<tool id="bio_hansel" name="bio_hansel" version="2.0.0"> + <description>SNV subtyping of genome sequence reads or assemblies</description> + <requirements> + <requirement type="package" version="2.0.0">bio_hansel</requirement> + </requirements> + <command detect_errors="exit_code"> +<![CDATA[ - ln -s '$data_type.fastq_input1' '$data_type.fastq_input1.name'.fastq && - ln -s '$data_type.fastq_input2' '$data_type.fastq_input2.name'.fastq && - - #elif $data_type.type == "collection": +#import re - ln -s '$data_type.fastq_input1.forward' '$data_type.fastq_input1.name'_1.fastq && - ln -s '$data_type.fastq_input1.reverse' '$data_type.fastq_input1.name'_2.fastq && - - #elif $data_type.type == "single": - - #if $data_type.fastq_input1.is_of_type('fastqsanger') or $data_type.fastq_input1.is_of_type('fastq'): - ln -s '$data_type.fastq_input1' '$data_type.fastq_input1.name'.fastq && - #end if +#def is_gzipped_fastq($data_input) + ## Is FASTQ data param gzipped type? i.e. either 'fastq.gz' or 'fastqsanger.gz'? + #return $data_input.is_of_type('fastqsanger.gz') or $data_input.is_of_type('fastq.gz') +#end def - #if $data_type.fastq_input1.is_of_type('fasta'): - ln -s '$data_type.fastq_input1' '$data_type.fastq_input1.name'.fasta && - #end if - - #end if - - - ## Checking for custom scheme. - #if $type_of_scheme.scheme_type == "custom": - #if $type_of_scheme.scheme_input.is_of_type('fasta'): - ln -s '$type_of_scheme.scheme_input' '$type_of_scheme.scheme_input.name' && - #end if - #end if +#def get_fastq_ext($data_input) + ## Get file extension for FASTQ data param + #return '.fastq.gz' if $is_gzipped_fastq($data_input) else '.fastq' +#end def - ## Start the actual command here - hansel - - - ## Select the scheme - -s - - #if $type_of_scheme.scheme_type == "heidelberg": - heidelberg - #elif $type_of_scheme.scheme_type == "enteritidis": - enteritidis - #elif $type_of_scheme.scheme_type == "custom": - '$type_of_scheme.scheme_input.name' - #end if +#def base_sample_name($name) + #if $re.search(r'_R(1|2)', $name): + #return $re.sub(r'(.+)_R(1|2)([^\.]*)(\..+)', r'\1\3', $name) + #elif $re.match(r'.+_\d\.', $name): + #return $re.sub(r'(.+)_(\d)(\..+)', r'\1', $name) + #else + #return $name + #end if +#end def - ## Use Json output - #if $dev_args.use_json == "yes": - --json - #end if - - #if $kmer_vals.kmer_min - --min-kmer-freq $kmer_vals.kmer_min - #end if - - #if $kmer_vals.kmer_max - --max-kmer-freq $kmer_vals.kmer_max - #end if - - #if $qc_vals.low_cov_depth_freq - --low-cov-depth-freq $qc_vals.low_cov_depth_freq - #end if - - #if $qc_vals.max_missing_tiles - --max-missing-tiles $qc_vals.max_missing_tiles - #end if - - #if $qc_vals.min_ambiguous_tiles - --min-ambiguous-tiles $qc_vals.min_ambiguous_tiles - #end if +#def get_paired_fastq_filename($data_input, $name=None, $is_forward=True) + ## Get paired FASTQ filename for a data param with appropriate file extension + ## with '_1' or '_2' appended if forward or reverse reads, respectively. + #set $name = $name if $name is not None else $data_input.name + #set $name = $base_sample_name($name) + #set $postfix = '1' if $is_forward else '2' + #set $ending = '_{}{}'.format($postfix, $get_fastq_ext($data_input)) + #return '"{}"'.format($name) if $ending in $name else '"{}{}"'.format($name, $ending) +#end def - #if $qc_vals.max_intermediate_tiles - --max-intermediate-tiles $qc_vals.max_intermediate_tiles - #end if - - #if $qc_vals.low_coverage_warning - --low-cov-warning $qc_vals.low_coverage_warning - #end if - - ## Adding more parameters to the command. - -vvv -t "\${GALAXY_SLOTS:-1}" -o results.tab -O match_results.tab -S tech_results.tab - - - ## Entering the file inputs +## Create symlinks from Galaxy *.dat to <sample_name>(.fasta|.fastq|.fastq.gz) +#if $input.type == 'fasta' +#set $input_files = '"{}"'.format($input.fasta.name) + ln -s "$input.fasta" $input_files && +#elif $input.type == 'paired' +#set $forward_filename = $get_paired_fastq_filename($input.forward) +#set $reverse_filename = $get_paired_fastq_filename($input.reverse, is_forward=False) +#set $input_files = '{} {}'.format($forward_filename, $reverse_filename) + ln -s "$input.forward" $forward_filename && + ln -s "$input.reverse" $reverse_filename && +#elif $input.type == 'single' +#set $input_files = '"{}"'.format($input.single.name) + ln -s "$input.single" $input_files && +#elif $input.type == 'paired_collection' +#set $forward_filename = $get_paired_fastq_filename($input.paired_collection.forward, $input.paired_collection.name) +#set $reverse_filename = $get_paired_fastq_filename($input.paired_collection.reverse, $input.paired_collection.name, is_forward=False) +#set $input_files = '{} {}'.format($forward_filename, $reverse_filename) + ln -s "$input.paired_collection.forward" $forward_filename && + ln -s "$input.paired_collection.reverse" $reverse_filename && +#end if - #if $data_type.type == "single": - - #if $data_type.fastq_input1.is_of_type('fastqsanger') or $data_type.fastq_input1.is_of_type('fastq'): - '$data_type.fastq_input1.name'.fastq - #end if - - #if $data_type.fastq_input1.is_of_type('fasta'): - '$data_type.fastq_input1.name'.fasta - #end if - - #elif $data_type.type =="collection": - -p '$data_type.fastq_input1.name'_1.fastq '$data_type.fastq_input1.name'_2.fastq - - #elif $data_type.type =="paired": - -p '$data_type.fastq_input1.name'.fastq '$data_type.fastq_input2.name'.fastq - #end if +## Checking for custom scheme. +#if $type_of_scheme.scheme_type == "custom": + #if $type_of_scheme.scheme_input.is_of_type('fasta'): + ln -s '$type_of_scheme.scheme_input' '$type_of_scheme.scheme_input.name' && + #end if +#end if - ]]></command> - <inputs> - <conditional name="data_type"> - <param name="type" type="select" label="Specify the read type."> - <option value="single">Single-end Data</option> - <option value="paired">Paired-end Data</option> - <option value="collection">Collection Paired-end Data</option> - </param> - <when value="single"> - <param name="fastq_input1" type="data" format="fastqsanger, fastq, fasta" label="Single end read file(s)"/> - </when> - <when value="paired"> - <param name="fastq_input1" type="data" format="fastqsanger, fastq" label="Forward paired-end read file"/> - <param name="fastq_input2" type="data" format="fastqsanger, fastq" label="Reverse paired-end read file"/> - </when> - <when value="collection"> - <param name="fastq_input1" type="data_collection" label="Paired-end reads collection" optional="false" format="fastqsanger, fastq" collection_type="paired" /> - </when> - </conditional> - <conditional name="type_of_scheme"> - <param name="scheme_type" type="select" label="Specify scheme to use. (Heidelberg is default)"> - <option value="heidelberg">Heidelberg scheme</option> - <option value="enteritidis">Enteritidis scheme</option> - <option value="custom">Specify your own custom scheme</option> - </param> - <when value="heidelberg"/> - <when value="enteritidis"/> - <when value="custom"> - <param name="scheme_input" type="data" format="fasta" label="Scheme Input"/> - </when> - </conditional> - <!-- K-mer frequencies. --> - <section name="kmer_vals" title="K-mer Frequency Thresholds" expanded="False"> - <param name="kmer_min" argument="--min-kmer-freq" optional="True" type="integer" min="0" label="Min k-mer freq/coverage" value="8" help="default = 8"/> - <param name="kmer_max" argument="--max-kmer-freq" optional="True" type="integer" min="1" label="Max k-mer freq/coverage" value="1000" help="default = 1000"/> - </section> - <!-- Quality Checking Parameters --> - <section name="qc_vals" title="Quality Checking Thresholds" expanded="False"> - <param name="low_cov_depth_freq" argument="--low-cov-depth-freq" optional="True" type="integer" min="0" label="QC: Frequency below this coverage are considered low coverage" value="20" help="default = 20"/> - <param name="min_ambiguous_tiles" argument="--min-ambiguous-tiles" optional="True" type="integer" min="0" label="QC: Min number of tiles missing for Ambiguous Result" value="3" help="default = 3"/> - <param name="max_missing_tiles" argument="--max-missing-tiles" optional="True" type="float" min="0" max="1" label="QC: Decimal Proportion of max allowed missing tiles" value="0.05" help="default = 0.05, valid values {0.0 - 1.0}"/> - <param name="max_intermediate_tiles" argument="--max-intermediate-tiles" optional="True" type="float" min="0" max="1" label="QC: Decimal Proportion of max allowed missing tiles for an intermediate subtype" value="0.05" help="default = 0.05, valid values {0.0 - 1.0}"/> - <param name="low_coverage_warning" argument="--low-cov-warning" optional="True" type="integer" min="0" label="QC: Overall tile coverage below this value will trigger a low coverage warning" value="20" help="default = 20"/> - </section> - <section name="dev_args" title="Developer Options" expanded="False"> - <param name="use_json" type="select" label="Enable JSON output" help="Use this option of you need json representations of analysis' details"> - <option value="no">no</option> - <option value="yes">yes</option> - </param> - </section> - </inputs> - <outputs> - <data format="tabular" name="results.tab" from_work_dir="results.tab" label="results.tab"/> - <data format="tabular" name="match_results.tab" from_work_dir="match_results.tab" label="match_results.tab"/> - <data format="tabular" name="tech_results.tab" from_work_dir="tech_results.tab" label="tech_results.tab"/> - <data format="json" name="results.json" from_work_dir="results.tab.json" label="results.json"> - <filter>dev_args['use_json'] == "yes"</filter> - </data> - <data format="json" name="match_results.json" from_work_dir="match_results.tab.json" label="match_results.json"> - <filter>dev_args['use_json'] == "yes"</filter> - </data> - <data format="json" name="tech_results.json" from_work_dir="tech_results.tab.json" label="tech_results.json"> - <filter>dev_args['use_json'] == "yes"</filter> - </data> - </outputs> - <tests> - <test> - <param name="type" value="single"/> - <param name="type_of_scheme" value="heidelberg"/> - <param name="fastq_input1" value="SRR1002850_SMALL.fasta"/> - <output name="results.tab"> - <assert_contents> - <has_text_matching expression="sample\s+scheme\s+scheme_version\s+subtype\s+all_subtypes\s+tiles_matching_subtype\s+are_subtypes_consistent\s+inconsistent_subtypes\s+n_tiles_matching_all\s+n_tiles_matching_all_expected\s+n_tiles_matching_positive\s+n_tiles_matching_positive_expected\s+n_tiles_matching_subtype\s+n_tiles_matching_subtype_expected\s+file_path\s+qc_status\s+qc_message"/> - </assert_contents> - </output> - <output name="match_results.tab"> - <assert_contents> - <has_text_matching expression="tilename\s+seq\s+is_revcomp\s+contig_id\s+match_index\s+refposition\s+subtype\s+is_pos_tile\s+sample\s+file_path\s+scheme\s+scheme_version\s+qc_status\s+qc_message"/> - </assert_contents> - </output> - <output name="tech_results.tab"> - <assert_contents> - <has_text_matching expression="sample\s+subtype\s+qc_status\s+qc_message"/> - </assert_contents> - </output> - </test> - <test> - <param name="type" value="paired"/> - <param name="type_of_scheme" value="heidelberg"/> - <param name="fastq_input1" value="SRR5646583_SMALL_1.fastq"/> - <param name="fastq_input2" value="SRR5646583_SMALL_2.fastq"/> - <output name="results.tab"> - <assert_contents> - <has_text_matching expression="sample\s+scheme\s+scheme_version\s+subtype\s+all_subtypes\s+tiles_matching_subtype\s+are_subtypes_consistent\s+inconsistent_subtypes\s+n_tiles_matching_all\s+n_tiles_matching_all_expected\s+n_tiles_matching_positive\s+n_tiles_matching_positive_expected\s+n_tiles_matching_subtype\s+n_tiles_matching_subtype_expected\s+file_path\s+avg_tile_coverage\s+qc_status\s+qc_message"/> - </assert_contents> - </output> - <output name="match_results.tab"> - <assert_contents> - <has_text_matching expression="tilename\s+seq\s+freq\s+refposition\s+subtype\s+is_pos_tile\s+is_kmer_freq_okay\s+sample\s+scheme\s+scheme_version\s+qc_status\s+qc_message"/> - </assert_contents> - </output> - <output name="tech_results.tab"> - <assert_contents> - <has_text_matching expression="sample\s+subtype\s+avg_tile_coverage\s+qc_status\s+qc_message"/> - </assert_contents> - </output> - </test> - </tests> - <help><![CDATA[ +hansel + -vvv + -t "\${GALAXY_SLOTS:-1}" + -o results.tab + -O match_results.tab + -S tech_results.tab + $dev_args.use_json + $input_files + --scheme +#if $type_of_scheme.scheme_type == "custom": + '$type_of_scheme.scheme_input.name' +#else: + $type_of_scheme.scheme_type +#end if +#if $kmer_vals.kmer_min + --min-kmer-freq $kmer_vals.kmer_min +#end if +#if $kmer_vals.kmer_max + --max-kmer-freq $kmer_vals.kmer_max +#end if +#if $qc_vals.low_cov_depth_freq + --low-cov-depth-freq $qc_vals.low_cov_depth_freq +#end if +#if $qc_vals.max_missing_tiles + --max-missing-tiles $qc_vals.max_missing_tiles +#end if +#if $qc_vals.min_ambiguous_tiles + --min-ambiguous-tiles $qc_vals.min_ambiguous_tiles +#end if +#if $qc_vals.max_intermediate_tiles + --max-intermediate-tiles $qc_vals.max_intermediate_tiles +#end if +#if $qc_vals.low_coverage_warning + --low-cov-warning $qc_vals.low_coverage_warning +#end if +]]> + </command> + <inputs> + <conditional name="input"> + <param name="type" type="select" label="Sequence input type"> + <option value="fasta">FASTA</option> + <option value="paired">Paired-end FASTQs</option> + <option value="single">Single-end FASTQ</option> + <option value="paired_collection">Paired-end FASTQ collection</option> + </param> + <when value="fasta"> + <param name="fasta" + type="data" format="fasta" + optional="false" + label="FASTA file" + /> + </when> + <when value="paired"> + <param name="forward" + type="data" format="fastq,fastqsanger,fastq.gz,fastqsanger.gz" + optional="false" + label="Forward FASTQ file" + help="Must have ASCII encoded quality scores" + /> + <param name="reverse" + type="data" format="fastq,fastqsanger,fastq.gz,fastqsanger.gz" + optional="false" + label="Reverse FASTQ file" + help="File format must match the Forward FASTQ file" + /> + </when> + <when value="single"> + <param name="single" + type="data" format="fastq,fastqsanger,fastq.gz,fastqsanger.gz" + optional="false" + label="Single-end FASTQ file" + /> + </when> + <when value="paired_collection"> + <param name="paired_collection" + type="data_collection" format="fastq,fastqsanger,fastq.gz,fastqsanger.gz,txt" + collection_type="paired" + optional="false" + label="Paired-end FASTQ collection" + help="" + /> + </when> + </conditional> + <conditional name="type_of_scheme"> + <param name="scheme_type" type="select" label="Specify scheme to use. (Heidelberg is default)"> + <option value="heidelberg">Salmonella Heidelberg subtyping scheme</option> + <option value="enteritidis">Salmonella Enteritidis subtyping scheme</option> + <option value="custom">Specify your own custom scheme</option> + </param> + <when value="heidelberg"/> + <when value="enteritidis"/> + <when value="custom"> + <param name="scheme_input" type="data" format="fasta" label="Scheme Input"/> + </when> + </conditional> + <!-- K-mer frequencies. --> + <section name="kmer_vals" title="K-mer Frequency Thresholds" expanded="False"> + <param name="kmer_min" type="integer" + argument="--min-kmer-freq" + optional="true" + min="0" value="8" + label="Min k-mer frequency/coverage" + help="default = 8"/> + <param name="kmer_max" type="integer" + argument="--max-kmer-freq" + optional="true" + min="1" value="1000" + label="Max k-mer frequency/coverage" + help="default = 1000"/> + </section> + <!-- Quality Checking Parameters --> + <section name="qc_vals" title="Quality Checking Thresholds" expanded="False"> + <param name="low_cov_depth_freq" type="integer" + argument="--low-cov-depth-freq" + value="20" min="0" + optional="true" + label="QC: Frequency below this coverage are considered low coverage" + help="default = 20"/> + <param name="min_ambiguous_tiles" type="integer" + argument="--min-ambiguous-tiles" + optional="true" + value="3" min="0" + label="QC: Min number of tiles missing for Ambiguous Result" + help="default = 3"/> + <param name="max_missing_tiles" type="float" + argument="--max-missing-tiles" + optional="true" + value="0.05" min="0" max="1" + label="QC: Decimal Proportion of max allowed missing tiles" help="default = 0.05, valid values {0.0 - 1.0}"/> + <param name="max_intermediate_tiles" type="float" + argument="--max-intermediate-tiles" + optional="true" + value="0.05" min="0" max="1" + label="QC: Decimal Proportion of max allowed missing tiles for an intermediate subtype" + help="default = 0.05, valid values {0.0 - 1.0}"/> + <param name="low_coverage_warning" type="integer" + argument="--low-cov-warning" + optional="true" + value="20" + label="QC: Overall tile coverage below this value will trigger a low coverage warning" + help="default = 20"/> + </section> + <section name="dev_args" title="Developer Options" expanded="False"> + <param name="use_json" + type="boolean" + checked="false" + truevalue="--json" + falsevalue="" + label="Output JSON results" + help="Use this option of you need json representations of analysis' details"/> + </section> + </inputs> + <outputs> + <data format="tabular" name="results.tab" from_work_dir="results.tab" label="results.tab"/> + <data format="tabular" name="match_results.tab" from_work_dir="match_results.tab" label="match_results.tab"/> + <data format="tabular" name="tech_results.tab" from_work_dir="tech_results.tab" label="tech_results.tab"/> + <data format="json" name="results.json" from_work_dir="results.tab.json" label="results.json"> + <filter>dev_args['use_json']</filter> + </data> + <data format="json" name="match_results.json" from_work_dir="match_results.tab.json" label="match_results.json"> + <filter>dev_args['use_json']</filter> + </data> + <data format="json" name="tech_results.json" from_work_dir="tech_results.tab.json" label="tech_results.json"> + <filter>dev_args['use_json']</filter> + </data> + </outputs> + <tests> + <test> + <conditional name="input"> + <param name="type" value="fasta"/> + <param name="fasta" value="SRR1002850_SMALL.fasta"/> + </conditional> + <param name="type_of_scheme" value="heidelberg"/> + <output name="results.tab" + value="SRR1002850_SMALL.fasta-results.tab" + ftype="tabular" + compare="sim_size" + delta="1000"> + </output> + <output name="match_results.tab" + value="SRR1002850_SMALL.fasta-match_results.tab" + ftype="tabular" + compare="sim_size" + delta="16000"> + </output> + <output name="tech_results.tab" + value="SRR1002850_SMALL.fasta-tech_results.tab" + ftype="tabular" + lines_diff="0"> + </output> + </test> + <test> + <conditional name="input"> + <param name="type" value="paired"/> + <param name="forward" value="SRR5646583_SMALL_1.fastq"/> + <param name="reverse" value="SRR5646583_SMALL_2.fastq"/> + </conditional> + <param name="type_of_scheme" value="heidelberg"/> + <output name="tech_results.tab" + value="SRR5646583_SMALL-tech_results.tab" + ftype="tabular" + lines_diff="0"> + </output> + <output name="results.tab" + value="SRR5646583_SMALL-results.tab" + ftype="tabular" + compare="sim_size" + delta="1000"> + </output> + <output name="match_results.tab" + value="SRR5646583_SMALL-match_results.tab" + ftype="tabular" + compare="sim_size" + delta="16000"> + </output> + </test> + </tests> + <help><![CDATA[ *********************************************************** - bio_hansel - Heidelberg And eNteritidis Snp ELucidation +bio_hansel *********************************************************** -Subtype *Salmonella enterica* subsp. enterica serovar Heidelberg and Enteritidis genomes using *in-silico* 33 bp k-mer SNP subtyping schemes developed by Genevieve Labbe et al. -Subtype *Salmonella* genome assemblies (FASTA files) and/or whole-genome sequencing reads (FASTQ files)! +Subtype microbial whole-genome sequencing (WGS) data using single-nucleotide variant (SNV) targeting k-mer subtyping schemes. + +Includes 33 bp k-mer SNV subtyping schemes for Salmonella enterica subsp. enterica serovar Heidelberg and Enteritidis genomes developed by Genevieve Labbe et al. Usage ===== @@ -241,47 +310,24 @@ Contents of ``results.tab``: - +------------+------------+-------------+------------------------------------------------+---------------------------------------------------------------+-------------------------+-----------------------+----------------------+----------------------------+---------------------------+---------------------------------+--------------------------+--------------------------------+------------+ - | sample | scheme | subtype | all_subtypes | tiles_matching_subtype | are_subtypes_consistent | inconsistent_subtypes | n_tiles_matching_all | n_tiles_matching_all_total | n_tiles_matching_positive | n_tiles_matching_positive_total | n_tiles_matching_subtype | n_tiles_matching_subtype_total | file_path | - +------------+------------+-------------+------------------------------------------------+---------------------------------------------------------------+-------------------------+-----------------------+----------------------+----------------------------+---------------------------+---------------------------------+--------------------------+--------------------------------+------------+ - | file.fasta | heidelberg | 2.2.2.2.1.4 | 2; 2.2; 2.2.2; 2.2.2.2; 2.2.2.2.1; 2.2.2.2.1.4 | 1037658-2.2.2.2.1.4; 2154958-2.2.2.2.1.4; 3785187-2.2.2.2.1.4 | True | | 202 | 202 | 17 | 17 | 3 | 3 | file.fasta | - +------------+------------+-------------+------------------------------------------------+---------------------------------------------------------------+-------------------------+-----------------------+----------------------+----------------------------+---------------------------+---------------------------------+--------------------------+--------------------------------+------------+ - + +------------------+------------+----------------+-------------+------------------------------------------------+---------------------------------------------------------------+-------------------------+-----------------------+----------------------+-------------------------------+---------------------------+------------------------------------+--------------------------+-----------------------------------+------------------------+-----------+------------+ + | sample | scheme | scheme_version | subtype | all_subtypes | tiles_matching_subtype | are_subtypes_consistent | inconsistent_subtypes | n_tiles_matching_all | n_tiles_matching_all_expected | n_tiles_matching_positive | n_tiles_matching_positive_expected | n_tiles_matching_subtype | n_tiles_matching_subtype_expected | file_path | qc_status | qc_message | + +------------------+------------+----------------+-------------+------------------------------------------------+---------------------------------------------------------------+-------------------------+-----------------------+----------------------+-------------------------------+---------------------------+------------------------------------+--------------------------+-----------------------------------+------------------------+-----------+------------+ + | SRR1002850_SMALL | heidelberg | 0.5.0 | 2.2.2.2.1.4 | 2; 2.2; 2.2.2; 2.2.2.2; 2.2.2.2.1; 2.2.2.2.1.4 | 2154958-2.2.2.2.1.4; 1037658-2.2.2.2.1.4; 3785187-2.2.2.2.1.4 | True | | 202 | 202 | 17 | 17 | 3 | 3 | SRR1002850_SMALL.fasta | PASS | | + +------------------+------------+----------------+-------------+------------------------------------------------+---------------------------------------------------------------+-------------------------+-----------------------+----------------------+-------------------------------+---------------------------+------------------------------------+--------------------------+-----------------------------------+------------------------+-----------+------------+ Contents of ``match_results.tab``: - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | tilename | stitle | pident | length | mismatch | gapopen | qstart | qend | sstart | send | evalue | bitscore | qlen | slen | seq | coverage | is_trunc | refposition | subtype | is_pos_tile | sample | file_path | scheme | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | 775920-2.2.2.2 | NODE_2_length_512016_cov_46.4737_ID_3 | 100 | 33 | 0 | 0 | 1 | 33 | 474875 | 474907 | 2E-11 | 62.1 | 33 | 512016 | GTTCAGGTGCTACCGAGGATCGTTTTTGGTGCG | 1 | False | 775920 | 2.2.2.2 | True | out | file.fasta | heidelberg | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | negative3305400-2.1.1.1 | NODE_3_length_427905_cov_48.1477_ID_5 | 100 | 33 | 0 | 0 | 1 | 33 | 276235 | 276267 | 2E-11 | 62.1 | 33 | 427905 | CATCGTGAAGCAGAACAGACGCGCATTCTTGCT | 1 | False | negative3305400 | 2.1.1.1 | False | out | file.fasta | heidelberg | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | negative3200083-2.1 | NODE_3_length_427905_cov_48.1477_ID_5 | 100 | 33 | 0 | 0 | 1 | 33 | 170918 | 170950 | 2E-11 | 62.1 | 33 | 427905 | ACCCGGTCTACCGCAAAATGGAAAGCGATATGC | 1 | False | negative3200083 | 2.1 | False | out | file.fasta | heidelberg | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | negative3204925-2.2.3.1.5 | NODE_3_length_427905_cov_48.1477_ID_5 | 100 | 33 | 0 | 0 | 1 | 33 | 175760 | 175792 | 2E-11 | 62.1 | 33 | 427905 | CTCGCTGGCAAGCAGTGCGGGTACTATCGGCGG | 1 | False | negative3204925 | 2.2.3.1.5 | False | out | file.fasta | heidelberg | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | negative3230678-2.2.2.1.1.1 | NODE_3_length_427905_cov_48.1477_ID_5 | 100 | 33 | 0 | 0 | 1 | 33 | 201513 | 201545 | 2E-11 | 62.1 | 33 | 427905 | AGCGGTGCGCCAAACCACCCGGAATGATGAGTG | 1 | False | negative3230678 | 2.2.2.1.1.1 | False | out | file.fasta | heidelberg | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | negative3233869-2.1.1.1.1 | NODE_3_length_427905_cov_48.1477_ID_5 | 100 | 33 | 0 | 0 | 1 | 33 | 204704 | 204736 | 2E-11 | 62.1 | 33 | 427905 | CAGCGCTGGTATGTGGCTGCACCATCGTCATTA | 1 | False | negative3233869 | 2.1.1.1.1 | False | out | file.fasta | heidelberg | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | negative3254229-2.2.3.1.3 | NODE_3_length_427905_cov_48.1477_ID_5 | 100 | 33 | 0 | 0 | 1 | 33 | 225064 | 225096 | 2E-11 | 62.1 | 33 | 427905 | CGCCACCACGCGGTTAGCGTCACGCTGACATTC | 1 | False | negative3254229 | 2.2.3.1.3 | False | out | file.fasta | heidelberg | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | negative3257074-2.2.1 | NODE_3_length_427905_cov_48.1477_ID_5 | 100 | 33 | 0 | 0 | 1 | 33 | 227909 | 227941 | 2E-11 | 62.1 | 33 | 427905 | CGGCAACCAGACCGACTACGCCGCCAAGCAGAC | 1 | False | negative3257074 | 2.2.1 | False | out | file.fasta | heidelberg | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | negative3264474-2.2.2.1.1.1 | NODE_3_length_427905_cov_48.1477_ID_5 | 100 | 33 | 0 | 0 | 1 | 33 | 235309 | 235341 | 2E-11 | 62.1 | 33 | 427905 | AATGGCGCCGATCGTCGCCAGATAACCGTTGCC | 1 | False | negative3264474 | 2.2.2.1.1.1 | False | out | file.fasta | heidelberg | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | negative3267927-2.2.2.2.2.1 | NODE_3_length_427905_cov_48.1477_ID_5 | 100 | 33 | 0 | 0 | 1 | 33 | 238762 | 238794 | 2E-11 | 62.1 | 33 | 427905 | AAAGAGAAATATGATGCCAGGCTGATACATGAC | 1 | False | negative3267927 | 2.2.2.2.2.1 | False | out | file.fasta | heidelberg | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | negative3278067-1.1 | NODE_3_length_427905_cov_48.1477_ID_5 | 100 | 33 | 0 | 0 | 1 | 33 | 248902 | 248934 | 2E-11 | 62.1 | 33 | 427905 | TGTGAGTAAGTTGCGCGATATTCTGCTGGATTC | 1 | False | negative3278067 | 1.1 | False | out | file.fasta | heidelberg | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | negative3299717-2.2.3.1.4 | NODE_3_length_427905_cov_48.1477_ID_5 | 100 | 33 | 0 | 0 | 1 | 33 | 270552 | 270584 | 2E-11 | 62.1 | 33 | 427905 | ATGCCGGACAGCAGGCGAAACTCGAACCGGATA | 1 | False | negative3299717 | 2.2.3.1.4 | False | out | file.fasta | heidelberg | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ - | negative3373069-2.2.2.2.1.1 | NODE_3_length_427905_cov_48.1477_ID_5 | 100 | 33 | 0 | 0 | 1 | 33 | 344011 | 344043 | 2E-11 | 62.1 | 33 | 427905 | CTCTCCAGAAGATGAAGCCCGTGATGCGGCGCA | 1 | False | negative3373069 | 2.2.2.2.1.1 | False | out | file.fasta | heidelberg | - +-----------------------------+---------------------------------------+--------+--------+----------+---------+--------+------+--------+--------+--------+----------+------+--------+-----------------------------------+----------+----------+-----------------+-------------+-------------+--------+------------+------------+ + +---------------------------+-----------------------------------+------------+---------------------------------------+-------------+-------------+-------------+-------------+------------------+------------------------+------------+----------------+-----------+------------+ + | tilename | seq | is_revcomp | contig_id | match_index | refposition | subtype | is_pos_tile | sample | file_path | scheme | scheme_version | qc_status | qc_message | + +---------------------------+-----------------------------------+------------+---------------------------------------+-------------+-------------+-------------+-------------+------------------+------------------------+------------+----------------+-----------+------------+ + | 2154958-2.2.2.2.1.4 | GGCGCGCCACGGTTACTCCCCGGTGGTCAGCCG | True | NODE_1_length_726282_cov_40.4705_ID_1 | 13732 | 2154958 | 2.2.2.2.1.4 | True | SRR1002850_SMALL | SRR1002850_SMALL.fasta | heidelberg | 0.5.0 | PASS | | + +---------------------------+-----------------------------------+------------+---------------------------------------+-------------+-------------+-------------+-------------+------------------+------------------------+------------+----------------+-----------+------------+ + | negative2131791-2.2.3.1.3 | GCTGGGCGAAATGATGCAGTTCACCACTTGCTC | True | NODE_1_length_726282_cov_40.4705_ID_1 | 36900 | 2131791 | 2.2.3.1.3 | False | SRR1002850_SMALL | SRR1002850_SMALL.fasta | heidelberg | 0.5.0 | PASS | | + +---------------------------+-----------------------------------+------------+---------------------------------------+-------------+-------------+-------------+-------------+------------------+------------------------+------------+----------------+-----------+------------+ - Next 196 lines omitted. + *Next 201 lines omitted.* @@ -290,42 +336,33 @@ Contents of ``results.tab``: - +--------+------------+-------------+------------------------------------------------+------------------------------------------+-------------------------+-----------------------+----------------------+----------------------------+---------------------------+---------------------------------+--------------------------+--------------------------------+------------------------------------------+ - | sample | scheme | subtype | all_subtypes | tiles_matching_subtype | are_subtypes_consistent | inconsistent_subtypes | n_tiles_matching_all | n_tiles_matching_all_total | n_tiles_matching_positive | n_tiles_matching_positive_total | n_tiles_matching_subtype | n_tiles_matching_subtype_total | file_path | - +--------+------------+-------------+------------------------------------------------+------------------------------------------+-------------------------+-----------------------+----------------------+----------------------------+---------------------------+---------------------------------+--------------------------+--------------------------------+------------------------------------------+ - | 564 | heidelberg | 2.2.1.1.1.1 | 2; 2.2; 2.2.1; 2.2.1.1; 2.2.1.1.1; 2.2.1.1.1.1 | 1983064-2.2.1.1.1.1; 4211912-2.2.1.1.1.1 | True | | 202 | 202 | 20 | 20 | 2 | 2 | forward.fastqsanger; reverse.fastqsanger | - +--------+------------+-------------+------------------------------------------------+------------------------------------------+-------------------------+-----------------------+----------------------+----------------------------+---------------------------+---------------------------------+--------------------------+--------------------------------+------------------------------------------+ - + +------------------+------------+----------------+-------------+------------------------------------------------+------------------------------------------+-------------------------+-----------------------+----------------------+-------------------------------+---------------------------+------------------------------------+--------------------------+-----------------------------------+----------------------------------------------------------+-------------------+-----------+------------+ + | sample | scheme | scheme_version | subtype | all_subtypes | tiles_matching_subtype | are_subtypes_consistent | inconsistent_subtypes | n_tiles_matching_all | n_tiles_matching_all_expected | n_tiles_matching_positive | n_tiles_matching_positive_expected | n_tiles_matching_subtype | n_tiles_matching_subtype_expected | file_path | avg_tile_coverage | qc_status | qc_message | + +------------------+------------+----------------+-------------+------------------------------------------------+------------------------------------------+-------------------------+-----------------------+----------------------+-------------------------------+---------------------------+------------------------------------+--------------------------+-----------------------------------+----------------------------------------------------------+-------------------+-----------+------------+ + | SRR5646583_SMALL | heidelberg | 0.5.0 | 2.2.1.1.1.1 | 2; 2.2; 2.2.1; 2.2.1.1; 2.2.1.1.1; 2.2.1.1.1.1 | 1983064-2.2.1.1.1.1; 4211912-2.2.1.1.1.1 | True | | 202 | 202 | 20 | 20 | 2 | 2 | ['SRR5646583_SMALL_1.fastq', 'SRR5646583_SMALL_2.fastq'] | 42.631 | PASS | | + +------------------+------------+----------------+-------------+------------------------------------------------+------------------------------------------+-------------------------+-----------------------+----------------------+-------------------------------+---------------------------+------------------------------------+--------------------------+-----------------------------------+----------------------------------------------------------+-------------------+-----------+------------+ Contents of ``match_results.tab``: - +-----------------------------------+------+--------+------------------------------------------+------------------+-------------+-----------+-------------+-------------------+------------+ - | seq | freq | sample | file_path | tilename | is_pos_tile | subtype | refposition | is_kmer_freq_okay | scheme | - +-----------------------------------+------+--------+------------------------------------------+------------------+-------------+-----------+-------------+-------------------+------------+ - | ACGGTAAAAGAGGACTTGACTGGCGCGATTTGC | 68 | 564 | forward.fastqsanger; reverse.fastqsanger | 21097-2.2.1.1.1 | True | 2.2.1.1.1 | 21097 | True | heidelberg | - +-----------------------------------+------+--------+------------------------------------------+------------------+-------------+-----------+-------------+-------------------+------------+ - | AACCGGCGGTATTGGCTGCGGTAAAAGTACCGT | 77 | 564 | forward.fastqsanger; reverse.fastqsanger | 157792-2.2.1.1.1 | True | 2.2.1.1.1 | 157792 | True | heidelberg | - +-----------------------------------+------+--------+------------------------------------------+------------------+-------------+-----------+-------------+-------------------+------------+ - | CCGCTGCTTTCTGAAATCGCGCGTCGTTTCAAC | 67 | 564 | forward.fastqsanger; reverse.fastqsanger | 293728-2.2.1.1 | True | 2.2.1.1 | 293728 | True | heidelberg | - +-----------------------------------+------+--------+------------------------------------------+------------------+-------------+-----------+-------------+-------------------+------------+ - | GAATAACAGCAAAGTGATCATGATGCCGCTGGA | 91 | 564 | forward.fastqsanger; reverse.fastqsanger | 607438-2.2.1 | True | 2.2.1 | 607438 | True | heidelberg | - +-----------------------------------+------+--------+------------------------------------------+------------------+-------------+-----------+-------------+-------------------+------------+ - | CAGTTTTACATCCTGCGAAATGCGCAGCGTCAA | 87 | 564 | forward.fastqsanger; reverse.fastqsanger | 691203-2.2.1.1 | True | 2.2.1.1 | 691203 | True | heidelberg | - +-----------------------------------+------+--------+------------------------------------------+------------------+-------------+-----------+-------------+-------------------+------------+ - | CAGGAGAAAGGATGCCAGGGTCAACACGTAAAC | 33 | 564 | forward.fastqsanger; reverse.fastqsanger | 944885-2.2.1.1.1 | True | 2.2.1.1.1 | 944885 | True | heidelberg | - +-----------------------------------+------+--------+------------------------------------------+------------------+-------------+-----------+-------------+-------------------+------------+ + +---------------------+-----------------------------------+------+-------------+-----------+-------------+-------------------+------------------+------------+----------------+-----------+------------+ + | tilename | seq | freq | refposition | subtype | is_pos_tile | is_kmer_freq_okay | sample | scheme | scheme_version | qc_status | qc_message | + +---------------------+-----------------------------------+------+-------------+-----------+-------------+-------------------+------------------+------------+----------------+-----------+------------+ + | negative4642573-1.2 | TACCAGGAAGTGCTGGAAGAGTTTAACGAACAT | 62 | 4642573 | 1.2 | False | True | SRR5646583_SMALL | heidelberg | 0.5.0 | PASS | | + +---------------------+-----------------------------------+------+-------------+-----------+-------------+-------------------+------------------+------------+----------------+-----------+------------+ + | 21097-2.2.1.1.1 | GCAAATCGCGCCAGTCAAGTCCTCTTTTACCGT | 42 | 21097 | 2.2.1.1.1 | True | True | SRR5646583_SMALL | heidelberg | 0.5.0 | PASS | | + +---------------------+-----------------------------------+------+-------------+-----------+-------------+-------------------+------------------+------------+----------------+-----------+------------+ - Next 200 lines omitted. + *Next 202 lines omitted.* -Galaxy wrapper written by Matthew Gopez at the Public Health Agency of Canada, National Microbiology Laboratory. +Galaxy wrapper written by Matthew Gopez and Peter Kruczkiewicz at the Public Health Agency of Canada, National Microbiology Laboratory. ]]></help> - <citations> - <citation type="bibtex">@ARTICLE{a1, - title = {A robust genotyping scheme for *Salmonella enterica* serovar Heidelberg clones circulating in North America.}, - author = {Geneviève Labbé, James Robertson, Peter Kruczkiewicz, Marisa Rankin, Matthew Gopez, Chad R. Laing, Philip Mabon, Kim Ziebell, Aleisha R. Reimer, Lorelee Tschetter, Gary Van Domselaar, Sadjia Bekal, Kimberley A. MacDonald, Linda Hoang, Linda Chui, Danielle Daignault, Durda Slavic, Frank Pollari, E. Jane Parmley, Elissa Giang, Lok Kan Lee, Jonathan Moffat, Joanne MacKinnon, Roger Johnson, John H.E. Nash.}, - url = {https://github.com/phac-nml/bio_hansel} - } - }</citation> - </citations> + <citations> + <citation type="bibtex">@ARTICLE{a1, + title = {A robust genotyping scheme for Salmonella enterica serovar Heidelberg clones circulating in North America}, + author = {Geneviève Labbé, James Robertson, Peter Kruczkiewicz, Marisa Rankin, Matthew Gopez, Chad R. Laing, Philip Mabon, Kim Ziebell, Aleisha R. Reimer, Lorelee Tschetter, Gary Van Domselaar, Sadjia Bekal, Kimberley A. MacDonald, Linda Hoang, Linda Chui, Danielle Daignault, Durda Slavic, Frank Pollari, E. Jane Parmley, Elissa Giang, Lok Kan Lee, Jonathan Moffat, Joanne MacKinnon, Roger Johnson, John H.E. Nash}, + url = {https://github.com/phac-nml/bio_hansel} + } + }</citation> + </citations> </tool>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/SRR1002850_SMALL.fasta-match_results.tab Wed May 09 15:06:32 2018 -0400 @@ -0,0 +1,203 @@ +tilename seq is_revcomp contig_id match_index refposition subtype is_pos_tile sample file_path scheme scheme_version qc_status qc_message +2154958-2.2.2.2.1.4 GGCGCGCCACGGTTACTCCCCGGTGGTCAGCCG True NODE_1_length_726282_cov_40.4705_ID_1 13732 2154958 2.2.2.2.1.4 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2131791-2.2.3.1.3 GCTGGGCGAAATGATGCAGTTCACCACTTGCTC True NODE_1_length_726282_cov_40.4705_ID_1 36900 2131791 2.2.3.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +2069216-2.2.2 ATACTTAGGCTGTCAGTAACCCGTGAGGTAGTG True NODE_1_length_726282_cov_40.4705_ID_1 99475 2069216 2.2.2 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2048364-2.1 GGTCGCGACAGGCCGAGCCAGAACAGGAAAAGC True NODE_1_length_726282_cov_40.4705_ID_1 120327 2048364 2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2045923-2.1.3 CGACATATTCCCGCACCGTGCCATGGCTCATCT True NODE_1_length_726282_cov_40.4705_ID_1 122768 2045923 2.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1983064-2.2.1.1.1.1 TCCAGCATATCGCCCAGGCGACTGAACGCAGGC True NODE_1_length_726282_cov_40.4705_ID_1 185627 1983064 2.2.1.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1976727-2.1 TACTTTATCTTTGTACTTATTCCACAATACGGA True NODE_1_length_726282_cov_40.4705_ID_1 191964 1976727 2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1950957-2.2.2.2.2.2 TTTCCTTGCCCTAATCGCGCCCTACGGCTGGTC True NODE_1_length_726282_cov_40.4705_ID_1 217734 1950957 2.2.2.2.2.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1910623-2.2.3.3 GCTCCGATTTTTGCCTGATAATTATCCAATTAC True NODE_1_length_726282_cov_40.4705_ID_1 258068 1910623 2.2.3.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1856421-2.1.1.1 GTTTGCGCAGCAGGCAGCCCCTGGCGAGCGGCT True NODE_1_length_726282_cov_40.4705_ID_1 312270 1856421 2.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1840959-2.2.2.2.7 CACCATTGAGCCGGTAATAATGCCGACAAAGGC True NODE_1_length_726282_cov_40.4705_ID_1 327846 1840959 2.2.2.2.7 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1831783-2.2.2.1.2 TTTTCCGGGCTTATCGGCAACGCTATTCTGGCC True NODE_1_length_726282_cov_40.4705_ID_1 337022 1831783 2.2.2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1825773-2.2.2.2.2 CATCCCGGTTCATAGCGGCTCCGCTACGCTAAA True NODE_1_length_726282_cov_40.4705_ID_1 343032 1825773 2.2.2.2.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1760974-2.2.3.1.3 TCGCGATGCGCAGGTCGGAGAAATCGCGCTAAA True NODE_1_length_726282_cov_40.4705_ID_1 407831 1760974 2.2.3.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1697407-2.2.2.2.1.5 ACACTGCCCAGAATAAGCGACACACAGCGCGCC True NODE_1_length_726282_cov_40.4705_ID_1 471398 1697407 2.2.2.2.1.5 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1689446-2.2.2.2.4 GGGCCGAAGACCTCGCGTTGCACGATGGCATCT True NODE_1_length_726282_cov_40.4705_ID_1 479359 1689446 2.2.2.2.4 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1649579-2.2.2.2.4 GCGCATCGCGCATTACTGATGAAATGCTGATGT True NODE_1_length_726282_cov_40.4705_ID_1 519226 1649579 2.2.2.2.4 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1603329-2.2.2.2.1.1 ATTGGCCAGGGCAAAGTCGCTGACTATATTCCG True NODE_1_length_726282_cov_40.4705_ID_1 565476 1603329 2.2.2.2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1534092-2.1.1.1 CCGTCGAGTGGGGGGCAATAGCGATAACCGTCC True NODE_1_length_726282_cov_40.4705_ID_1 634713 1534092 2.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1462807-2.2.3 ATAATGTTGCCGACGGCGCACACAAACGCCACA True NODE_1_length_726282_cov_40.4705_ID_1 705998 1462807 2.2.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4499501-1.1 TTGGCCGCCTTCGGCGCCAGTTCAAACCAGGTT True NODE_13_length_118043_cov_48.4501_ID_25 13603 4499501 1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4472427-1.3 GAGCTTTACCCCTGGCGCGATCGCGGACATATT True NODE_13_length_118043_cov_48.4501_ID_25 40677 4472427 1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4445342-2.2.2.2.5 TCCCGGGATTTTCAGGCAACCCTCCCGGTGATG True NODE_13_length_118043_cov_48.4501_ID_25 67762 4445342 2.2.2.2.5 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative944885-2.2.1.1.1 GTTTACGTGTTGACCCCGGCATCCTTTCTCCTG True NODE_9_length_160411_cov_40.0167_ID_17 81029 944885 2.2.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative908618-2.2.2.1.1.1 TTGACCACGCGCTGCGCGGCTGGCGGGCGTTTC True NODE_9_length_160411_cov_40.0167_ID_17 117296 908618 2.2.2.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative869993-2.2.1.1.3 CGGACTACTGAATCCCAGGTTCATCGCGAACTG True NODE_9_length_160411_cov_40.0167_ID_17 155916 869993 2.2.1.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative293728-2.2.1.1 GTTGAAACGACGCGCGGTTTCAGAAAGCAGCGG True NODE_5_length_234682_cov_47.2597_ID_9 1908 293728 2.2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative271435-2.2.1.1.3 TCGGGTGCAAATGGGATGGTAAGGAGTTTATTG True NODE_5_length_234682_cov_47.2597_ID_9 24201 271435 2.2.1.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative239152-2.2.2.2.2.1 TTCCGTCGATGTCACCCATTCCCGTGCGACGCT True NODE_5_length_234682_cov_47.2597_ID_9 56484 239152 2.2.2.2.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative227831-2.2.3.2.1 TCCCGGCGAATTTACCGTGCAGGCCAATAGCAT True NODE_5_length_234682_cov_47.2597_ID_9 67805 227831 2.2.3.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative205838-2.1.1.1.1 CTGTTCGCTGCCGTCGGTTTCTTTTACCGTCAC True NODE_5_length_234682_cov_47.2597_ID_9 89798 205838 2.1.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative202001-1.1 CTGGAAGAGGCGGAAATGCTGTGCCGCAATATC True NODE_5_length_234682_cov_47.2597_ID_9 93635 202001 1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative198398-2.2.2.1.1.1 GTACCGTCAACGGTAATATCCGCCAGCGTCGGC True NODE_5_length_234682_cov_47.2597_ID_9 97238 198398 2.2.2.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative176708-2.2.2.2.6 AATAGCGAGCTAATTATGAGGTTTGATATATGA True NODE_5_length_234682_cov_47.2597_ID_9 118928 176708 2.2.2.2.6 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative167020-2.2.2.1.1.1 TACGATCGGCAAGCGCGCCCATCACCGGATCGG True NODE_5_length_234682_cov_47.2597_ID_9 128615 167020 2.2.2.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative160366-2.2.1.2 CAGTATCTCTTCAAAGGACGTCATGCCTTGCTC True NODE_5_length_234682_cov_47.2597_ID_9 135269 160366 2.2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative157792-2.2.1.1.1 ACGGTACTTTTACCGCTGCCAATACCGCCGGTT True NODE_5_length_234682_cov_47.2597_ID_9 137843 157792 2.2.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative107801-2.2.1.2 TAGCGTTTTTTACTGCCAGTATCCGCGCCGCGG True NODE_5_length_234682_cov_47.2597_ID_9 187834 107801 2.2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative92666-1.3 TGCAGTGGTACAGCGTCCCTCCTTTACTCAAAT True NODE_5_length_234682_cov_47.2597_ID_9 202969 92666 1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative64709-2.1.3 CGCATGGTGGCAATTGCGCTGGCGGCATTTGAT True NODE_5_length_234682_cov_47.2597_ID_9 230926 64709 2.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2293563-2.2.2.1.2 ACCGGTCTCGTACATCGCAGCAATGATCTCATC True NODE_7_length_178659_cov_40.3043_ID_13 54759 2293563 2.2.2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2283825-2.1.1 TTGAGTGTAACTTCTCTTGCCCGCAGATGACCT True NODE_7_length_178659_cov_40.3043_ID_13 64497 2283825 2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2239956-1.2 CCAGGAAGCCATCATCGCTGCGGAACGCGCCGG True NODE_7_length_178659_cov_40.3043_ID_13 108367 2239956 1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +2217680-2.2.2.2.1 TCCCTGATTGCGGTGCAGATCCCGTTGCTCTTT True NODE_7_length_178659_cov_40.3043_ID_13 130643 2217680 2.2.2.2.1 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2213229-2.1.1.3 ATTCCAGTTGTCGCCGCGACGACATTTCGCTAA True NODE_7_length_178659_cov_40.3043_ID_13 135094 2213229 2.1.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2201150-2.2.2.2.7 GGTCGCGATCCTCTCCCGTGAACGTCAGGCTCA True NODE_7_length_178659_cov_40.3043_ID_13 147173 2201150 2.2.2.2.7 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1193219-1.1 GGTACAGATTAAGCAACTGCTCGACGTCGGCGC True NODE_18_length_90852_cov_41.5013_ID_35 36935 1193219 1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1174327-2.2.2.2.6 CCATTAACATACCGCCCAGGAAAGACATATCCT True NODE_18_length_90852_cov_41.5013_ID_35 55819 1174327 2.2.2.2.6 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1155229-2.2.3.1.5 GCTGACTGACGATCTGACCCACGTACAAATCAA True NODE_18_length_90852_cov_41.5013_ID_35 74917 1155229 2.2.3.1.5 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2904061-1.1 CTATAGGTGACAAAGCCGCGTTCAAACCAGGCG False NODE_12_length_131107_cov_44.0771_ID_23 6138 2904061 1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2928609-2.2.1 GTGAAGATAAGCCGCTGAAGTATCCCCATATGT False NODE_12_length_131107_cov_44.0771_ID_23 30686 2928609 2.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2934077-2.2.2.2.1.3 AATTAACCACATTGTTGCGAGGGATACTATGAC False NODE_12_length_131107_cov_44.0771_ID_23 36154 2934077 2.2.2.2.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2963935-2.1.3 TCATCCTGCTGCGGCAGTAAAATGTTCCCGGAT False NODE_12_length_131107_cov_44.0771_ID_23 66012 2963935 2.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3011381-2.1.1.3 GTTGAGCCACAGCTTGCGCCAGAGCGGCGTTTG False NODE_12_length_131107_cov_44.0771_ID_23 113457 3011381 2.1.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3012157-2.2.2.2.3 ATTCCACCAGCTCTGACGTACTCGCAGCACGCT False NODE_12_length_131107_cov_44.0771_ID_23 114233 3012157 2.2.2.2.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2741489-2.2.2.2.6 TATGAGCAAGCAACAGGTTAGAGTGTCTATGTT True NODE_10_length_158464_cov_45.2944_ID_19 16613 2741489 2.2.2.2.6 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2693425-2.2.2.2.3 GAGTAATTTGGTCAACTATTTACTTGAGTAAAT True NODE_10_length_158464_cov_45.2944_ID_19 64677 2693425 2.2.2.2.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2676021-2.2.3.2 AATTGCCCCACCACAGGCGTGCCGTCGGGTCTG True NODE_10_length_158464_cov_45.2944_ID_19 82081 2676021 2.2.3.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2673994-2.2.2.2.7 GATGCCGACATTACCGGTAATGGTCGCCAGTAG True NODE_10_length_158464_cov_45.2944_ID_19 84108 2673994 2.2.2.2.7 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2663535-2.2.3.2 AGATTCGCCGCGCAGCGACAACGAAGGCATATC True NODE_10_length_158464_cov_45.2944_ID_19 94567 2663535 2.2.3.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2658490-2.2.1.1.3 GCTGGTCAGCCACAACGCTGACGCTATTTCTGA True NODE_10_length_158464_cov_45.2944_ID_19 99612 2658490 2.2.1.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2606626-2.2.2.2.1.1 TTCGATAAAATCTTTCCAGTTCCCCAGTTCACG True NODE_10_length_158464_cov_45.2944_ID_19 150909 2606626 2.2.2.2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2605132-2.2.2.2.1.5 TTCTACGCAACAGCAGACCCTGAAAGTCGTTGA True NODE_10_length_158464_cov_45.2944_ID_19 152403 2605132 2.2.2.2.1.5 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative42232-2.2.2.2.2.2 CCTGAAAAAGCGTTCCCTGCCTGCCTGGAAGAG True NODE_6_length_203546_cov_46.7874_ID_11 17607 42232 2.2.2.2.2.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative21097-2.2.1.1.1 GCAAATCGCGCCAGTCGAGTCCTCTTTTACCGT True NODE_6_length_203546_cov_46.7874_ID_11 38742 21097 2.2.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2981-2.2.3.1.4 ACTGCCGCCGGAGCCGCGTGAAAATATTGTTTA True NODE_6_length_203546_cov_46.7874_ID_11 56858 2981 2.2.3.1.4 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +4744778-2.2 CTGCTTTAATTTTTGATCATGAGTTGGTGACGT True NODE_6_length_203546_cov_46.7874_ID_11 66508 4744778 2.2 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4738855-1.1 CACATCAAAACCCTGCGCGCTAAGCTACGCGCG True NODE_6_length_203546_cov_46.7874_ID_11 72431 4738855 1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4707754-1.3 CATCGCGAGCAGCCCGCGGGTATTCATCCAACC True NODE_6_length_203546_cov_46.7874_ID_11 103532 4707754 1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4696391-2.2.3.2.1 TGCCGATATTATTGAGGTTCAACTGCTGGCCGT True NODE_6_length_203546_cov_46.7874_ID_11 114895 4696391 2.2.3.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4642573-1.2 TACCAGGAAGTGCTGGAAGAGTTTAACGAACAT True NODE_6_length_203546_cov_46.7874_ID_11 168713 4642573 1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +3479768-2.2 CGCCTTGCCGCCGCCGTGCGCCACACAGGTCAG True NODE_26_length_45055_cov_50.2073_ID_51 23364 3479768 2.2 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1329594-2.1.1.2 AGGGGACGTTATTCGGCGACCAGCCACATATCA True NODE_14_length_117769_cov_39.6027_ID_27 113287 1329594 2.1.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4030144-2.2.3.2 TTCCTTTCTCTTTCGTTTGGTTATTAGTATGCC True NODE_22_length_77187_cov_52.2229_ID_43 378 4030144 2.2.3.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4013058-2.1.1.2 CGCGCAGGCGCCCAGCCCTCTTTGTCGGCGGAA True NODE_22_length_77187_cov_52.2229_ID_43 17464 4013058 2.1.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative467662-2.2.3.1.2 CTAACTTATGTCATAACGCCGTTGACCGCTGGC False NODE_2_length_512016_cov_46.4737_ID_3 166641 467662 2.2.3.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative484993-2.2.2.2.1.2 CGGGAATGGTTAAAGTCTGCGGATATGGCGCTT False NODE_2_length_512016_cov_46.4737_ID_3 183972 484993 2.2.2.2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative489687-2.2.3.2.1 CCTTGTCGTTAAATCCAGGCGGTATAGTAACGA False NODE_2_length_512016_cov_46.4737_ID_3 188666 489687 2.2.3.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative508759-2.2.2.2.1.3 CCTGGTGATTTCCAGCCAGAGCGGTAATCAACT False NODE_2_length_512016_cov_46.4737_ID_3 207737 508759 2.2.2.2.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative573259-2.2.2.2.5 ACCACAACGTCTGGCGGTACGTTTTTTATCACC False NODE_2_length_512016_cov_46.4737_ID_3 272237 573259 2.2.2.2.5 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative600350-2.1.2 GTCGGAAAATAAAAAACAGGTGAATTACGTACC False NODE_2_length_512016_cov_46.4737_ID_3 299336 600350 2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative600783-1.1 AGCGGCGGCGGTATTCGCGACTCGATTGAGGCG False NODE_2_length_512016_cov_46.4737_ID_3 299769 600783 1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative607438-2.2.1 TCCAGCGGCATCATGACCACTTTGCTGTTATTC False NODE_2_length_512016_cov_46.4737_ID_3 306424 607438 2.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative649988-2.2.2.1 GGAGCCGACAGGATGCCGAAACCGGGTGTGTGT False NODE_2_length_512016_cov_46.4737_ID_3 348974 649988 2.2.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative691203-2.2.1.1 CAGTTTTACATCCTGCAAAATGCGCAGCGTCAA False NODE_2_length_512016_cov_46.4737_ID_3 390189 691203 2.2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative720751-2.2.1.1.2 ATGGCCATCTGCATACCTGGGGCTTTAACTATA False NODE_2_length_512016_cov_46.4737_ID_3 419737 720751 2.2.1.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +775920-2.2.2.2 GTTCAGGTGCTACCGAGGATCGTTTTTGGTGCG False NODE_2_length_512016_cov_46.4737_ID_3 474906 775920 2.2.2.2 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4516469-2.2.3.1.1 TTTACTACGCTGCGGCGTATTGTTAACCCTGAT False NODE_17_length_93595_cov_48.0081_ID_33 2963 4516469 2.2.3.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4525936-2.2.2.2.3 CGGTAACGGTGTTGTGCTGTCTCCGGCCGCGCT False NODE_17_length_93595_cov_48.0081_ID_33 12430 4525936 2.2.2.2.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4540735-2.2.2.2.3 CGTAATACCGCGCGGGTTTTCACCGTAAGAACC False NODE_17_length_93595_cov_48.0081_ID_33 27229 4540735 2.2.2.2.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4542157-2.1.1.1.1 TGGGTGATGCGTATAGTTGGGTAGGCTACGCGG False NODE_17_length_93595_cov_48.0081_ID_33 28651 4542157 2.1.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4579224-1.1 TGATGATGGTCGCCATCGTTTTGCTGTTTGTGT False NODE_17_length_93595_cov_48.0081_ID_33 65718 4579224 1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4581051-2.2.1.2 TGACCCTCTTTACGCTTAAACGCCAGCCCACCG False NODE_17_length_93595_cov_48.0081_ID_33 67545 4581051 2.2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2878560-2.1.1.3 AGCGGGTATCGGCGGCGCCGTCTCAAACCGTAG True NODE_20_length_83804_cov_41.1851_ID_39 19449 2878560 2.1.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2877590-2.2.1.2 GTACCGCCAGTCCGGCCTGATTCGCTTTTGCTA True NODE_20_length_83804_cov_41.1851_ID_39 20419 2877590 2.2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2863936-2.2.3.2 AGTCGGCGCTAATTCTGCTGGCGACGGTGTACA True NODE_20_length_83804_cov_41.1851_ID_39 34073 2863936 2.2.3.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2592097-2.2.1.1.2 TGCAAACTATCACGACGCGGCGCAAGAGTTTGT True NODE_23_length_56003_cov_43.6933_ID_45 6889 2592097 2.2.1.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2561007-2.2.2.2.3 TGAGTCGTTTGAATCCGCTGGCGCTTATCTGAA True NODE_23_length_56003_cov_43.6933_ID_45 37979 2561007 2.2.2.2.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2805778-2.2.2.2.3 TTCAATGAGTTGCAGGCTTTTTTGTTGCATGTG True NODE_25_length_50957_cov_44.8346_ID_49 8349 2805778 2.2.2.2.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2802706-2.2.1.1 AACAGCGCTATTCCCCGTTCCACCGGCAGTTTT True NODE_25_length_50957_cov_44.8346_ID_49 11421 2802706 2.2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2801759-2.2.2.2.2.2 GACCTCGGTTCCCGCCCGCTGCTCGACGTGCTT True NODE_25_length_50957_cov_44.8346_ID_49 12368 2801759 2.2.2.2.2.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2785633-2.1 TCAGCCCGGAAGCGCTGCCGCAGCTTTATCAGT True NODE_25_length_50957_cov_44.8346_ID_49 28494 2785633 2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2778621-1.1 TTTATCTACCCGGGAAGCCTGGCGGCATCATCC True NODE_25_length_50957_cov_44.8346_ID_49 35506 2778621 1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2778422-2.2.2.2.3 ATGAAGCTTGATTCCAGGGCGTGACCGTTGCAG True NODE_25_length_50957_cov_44.8346_ID_49 35705 2778422 2.2.2.2.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4299778-2.2.3.2.1 CGTGCATACCGTGCTGGCCGGGTTTGTTGAAGT True NODE_28_length_31385_cov_55.2199_ID_55 10644 4299778 2.2.3.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4297704-2.2.3.1.2 CGGCTCCGATTCCGGGTGGTTGATGTTGGCGGG True NODE_28_length_31385_cov_55.2199_ID_55 12718 4297704 2.2.3.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4286359-2.2.3.2 TGAAGATCGTGAAGGTCTATCTGGCCGTTAAAC True NODE_28_length_31385_cov_55.2199_ID_55 24063 4286359 2.2.3.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4282538-2.1.3 TGTCTATCACTAAAGATCAAATCATTGAAGCAG True NODE_28_length_31385_cov_55.2199_ID_55 27884 4282538 2.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +2531225-2 TTCTTGGCTTAGTGCTAGTAGTGACGCGCGACG False NODE_30_length_15853_cov_41.3164_ID_59 4310 2531225 2 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1036874-2.2.2.1 GACAATGAGCAGAATTGTAGGGAATTTACAGAC False NODE_15_length_110824_cov_43.9277_ID_29 9031 1036874 2.2.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +1037658-2.2.2.2.1.4 GATGTGTTTGAACAGTATAATGCCGCCGTGCAA False NODE_15_length_110824_cov_43.9277_ID_29 9815 1037658 2.2.2.2.1.4 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1037736-2.2.2.1.1 GACTACCTGTTGAAAACCCGTGTACCGGATATG False NODE_15_length_110824_cov_43.9277_ID_29 9893 1037736 2.2.2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1047714-2.2.1.1.1 GCGAACTGGCGAAACGTCTTGGCGTGGAACAAC False NODE_15_length_110824_cov_43.9277_ID_29 19832 1047714 2.2.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1049933-1.1 CCAGCTAACGCGTTGACGCGCATTCGGCCTGCA False NODE_15_length_110824_cov_43.9277_ID_29 22051 1049933 1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1052031-2.2.2.2.1.3 ACCGTCGTTGCCTTGCAGGGGCTGACGCTGGCA False NODE_15_length_110824_cov_43.9277_ID_29 24149 1052031 2.2.2.2.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1061770-2.2.2.1 AAAATAAAGACGTTAAGCCGGGGTTAAGCATTC False NODE_15_length_110824_cov_43.9277_ID_29 33888 1061770 2.2.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1062011-2.1.2 TGTTGTGTGACGCATGCCGCATTTTCTCCTCGC False NODE_15_length_110824_cov_43.9277_ID_29 34129 1062011 2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1091342-2.2.3.1 TTAAAACCAATCTGGGCATAAGTCTGGTCGGCA False NODE_15_length_110824_cov_43.9277_ID_29 63460 1091342 2.2.3.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4327318-2.1.2 TTCCCGGCGAACCGTGTGGGTGACGACATCGAA True NODE_21_length_77933_cov_46.5295_ID_41 66497 4327318 2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1313808-2.1 CAATATGCGCGAAAAAGTGGTTGAGCATCCGCA True NODE_16_length_96818_cov_43.859_ID_31 13141 1313808 2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1288160-2.2.2.2.4 GCGTGGTATCGTCCTGCGCCAGATTTTGTGGCG True NODE_16_length_96818_cov_43.859_ID_31 38789 1288160 2.2.2.2.4 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative1276017-2.1 TGCTTGATTTGGGGGCCAACGTCGACTGTGACA True NODE_16_length_96818_cov_43.859_ID_31 50932 1276017 2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative862828-2.1 CGCCAAGTCTGGCACCTAACGGCACGATGGTAA True NODE_24_length_52535_cov_38.5337_ID_47 1940 862828 2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative848800-2.2.3.1 TCGTTATCAACAACCAGGTGGGTTTCACCACCT True NODE_24_length_52535_cov_38.5337_ID_47 15968 848800 2.2.3.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative842143-2.1.1.1.1 TGCCCAGCTCTTTCAGCACTTCGTGGCAGGTTT True NODE_24_length_52535_cov_38.5337_ID_47 22625 842143 2.1.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4120499-2.1.1.3 GTCGTACCAGATGAAGCGAAGTGTGTATTTTGT True NODE_19_length_89272_cov_52.2838_ID_37 4435 4120499 2.1.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4101230-2.1.2 CTTTTATTGCCTCGCAGATCGTTTTTCCTGTCA True NODE_19_length_89272_cov_52.2838_ID_37 23704 4101230 2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4086376-2.2.2.1.3 AGGTCTACCATCGCCCGTCGCGTTTCATCGGCG True NODE_19_length_89272_cov_52.2838_ID_37 38558 4086376 2.2.2.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4081360-2.2.2.2.1.5 TGCTGGTGGTTGAGCCGCCCTATGATCCTGAGT True NODE_19_length_89272_cov_52.2838_ID_37 43574 4081360 2.2.2.2.1.5 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4079393-2.2.3.2.1 ACCAGGATCATGACGCGCCGCTATTGCAGCAGT True NODE_19_length_89272_cov_52.2838_ID_37 45541 4079393 2.2.3.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4047770-2.2.2.1.2 TCCTGTTGTAATGTGGGTTCATTCGCACAGATA True NODE_19_length_89272_cov_52.2838_ID_37 77164 4047770 2.2.2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4035893-2.1.2 GTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCA True NODE_19_length_89272_cov_52.2838_ID_37 89041 4035893 2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3523461-2.2.2.2.4 CGATTTTACCGCCAGCAGCTTCGATAGCAGCAC False NODE_29_length_26108_cov_56.5784_ID_57 15150 3523461 2.2.2.2.4 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +4241351-2.2 GGGATTACGTCCATAAAGAATCCATGTTTTTTG True NODE_11_length_138141_cov_49.5639_ID_21 27082 4241351 2.2 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4215208-2.1.2 TAAGCGCAGCGCCATCAGACATTGATTGGCAAT True NODE_11_length_138141_cov_49.5639_ID_21 53225 4215208 2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4211912-2.2.1.1.1.1 GGAGTGCCGAATCAAATTTCCAGCGCATTGTCC True NODE_11_length_138141_cov_49.5639_ID_21 56521 4211912 2.2.1.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4178681-2.2.3.2 TCCACGCCCATCGCCTGTGCGATGCGAGCAAAA True NODE_11_length_138141_cov_49.5639_ID_21 89752 4178681 2.2.3.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4166216-1.2 TTTTTGTACTGTGAAACGATGATGCTATACGCC True NODE_11_length_138141_cov_49.5639_ID_21 102217 4166216 1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4157035-2.2.2.2.1.2 CCCAGGACTCCAGGCACATCTGCTCTTCTTCAC True NODE_11_length_138141_cov_49.5639_ID_21 111398 4157035 2.2.2.2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4145957-2.1 CGGTCGTCGTGGTAACGAGATCTTCAATTCTGC True NODE_11_length_138141_cov_49.5639_ID_21 122476 4145957 2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4136928-2.1.2 GATTTTGGAGTATCGTGGTCTGGCGAAGCTAAA True NODE_11_length_138141_cov_49.5639_ID_21 131505 4136928 2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative4136269-2.2.2.2.2 CCGCTGCTGGAAGATGAAAAAGTGCGCAAAGTG True NODE_11_length_138141_cov_49.5639_ID_21 132164 4136269 2.2.2.2.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3540924-2.2.2.2.2.2 ACCGCCGCTATTACAAGCGGCGGCTCTCAGTTT False NODE_4_length_411654_cov_48.8368_ID_7 5596 3540924 2.2.2.2.2.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3553986-2.2.3.3 AGAAGCTATCCGACTGATCCTCAGTAACGATCC False NODE_4_length_411654_cov_48.8368_ID_7 18658 3553986 2.2.3.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3580227-2.2.2.2.5 GCACCGCATCCCAGGACGTTTTCAGCGCTATTT False NODE_4_length_411654_cov_48.8368_ID_7 44668 3580227 2.2.2.2.5 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3586333-2.2.2.2.2.1 CGCTGGGGACTGTTTGGGGAGAATAATCAGGAG False NODE_4_length_411654_cov_48.8368_ID_7 50774 3586333 2.2.2.2.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3587211-2.2.1.1.2 TATTTCTCGCGAGACCGCGCGTGCCGCCCAGTC False NODE_4_length_411654_cov_48.8368_ID_7 51652 3587211 2.2.1.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3647258-2.2.2.2.2.1 TACGGGTAACTGTTATCGGTAACATTGTCCAAC False NODE_4_length_411654_cov_48.8368_ID_7 111699 3647258 2.2.2.2.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3671709-2.2.3.1.5 TCAGCGAGCAACAACCGTGCCAAAGCCGATGAG False NODE_4_length_411654_cov_48.8368_ID_7 136150 3671709 2.2.3.1.5 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +3677767-2 CTGGAGCAATTTAACCCCCCGTTCGGCCAACTG False NODE_4_length_411654_cov_48.8368_ID_7 142208 3677767 2 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3686624-2.2.2.2.5 CCGAAAGAAGACTAACGTCCCAGCGCTTTGCCG False NODE_4_length_411654_cov_48.8368_ID_7 151065 3686624 2.2.2.2.5 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3691258-2.2.2.1.1 GCACGTGACGTTTAGAGACGGAGTCCAGCTCAG False NODE_4_length_411654_cov_48.8368_ID_7 155699 3691258 2.2.2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3696399-2.2.2.2.2 TCATTTGTATAATAACCTATTGATCAGGCTAAT False NODE_4_length_411654_cov_48.8368_ID_7 160840 3696399 2.2.2.2.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3742501-2.1.1.3 CCTGCTGCCGCTGCACGATGGCAACCACTTCCC False NODE_4_length_411654_cov_48.8368_ID_7 206942 3742501 2.1.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +3766668-2.2 GGCCGTACCGTCGGTCTTGCCCAAAAGATAGTC False NODE_4_length_411654_cov_48.8368_ID_7 231109 3766668 2.2 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +3785187-2.2.2.2.1.4 TTAAAAAGCACCTCAGAGAATAGTCTTAATCCG False NODE_4_length_411654_cov_48.8368_ID_7 249628 3785187 2.2.2.2.1.4 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +3791096-2.2.2 AACTGCCGGTGGACGGAGGTTTCGACGATAACG False NODE_4_length_411654_cov_48.8368_ID_7 255537 3791096 2.2.2 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3801966-2.1.1 TCAACCATATTTACGATCACGTTAAGCCCATCC False NODE_4_length_411654_cov_48.8368_ID_7 266407 3801966 2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3802645-2.1 ATCGCGCCAGCCGCAGACGCTAACGTTCATTCC False NODE_4_length_411654_cov_48.8368_ID_7 267086 3802645 2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3811523-2.2.2.1.1 CACAATACTAATGAAGAGAAAGTACGCGACCAT False NODE_4_length_411654_cov_48.8368_ID_7 275964 3811523 2.2.2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3819645-2.2.2.2.3 TCGAATCTGGATACCCGCGTCACCAATATCGAA False NODE_4_length_411654_cov_48.8368_ID_7 284086 3819645 2.2.2.2.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3822905-2.2.1.1.3 GAGTCGCCAGCGTATGTATCTCGTTCCGCCCGT False NODE_4_length_411654_cov_48.8368_ID_7 287346 3822905 2.2.1.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +3827083-2.2.2.2.1 ACCGGGGAAATGCTGAACAGTTTCCGGGAACAC False NODE_4_length_411654_cov_48.8368_ID_7 291524 3827083 2.2.2.2.1 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3855172-2.2.3.1.3 CCGGTACTGATGGGTCCGCATACCTTTAACTTT False NODE_4_length_411654_cov_48.8368_ID_7 319613 3855172 2.2.3.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3864871-2.2.1.1 CCCTGACCTGGTTACTGATATTCAGAGCAGCTT False NODE_4_length_411654_cov_48.8368_ID_7 329312 3864871 2.2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3867228-1.1 TTACCGTTTTGATAAACCAGTGTTACCGCTACG False NODE_4_length_411654_cov_48.8368_ID_7 331669 3867228 1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3913221-1.3 CGGAGATCCCCAGATCCTGCGCCATCGGCGTCA False NODE_4_length_411654_cov_48.8368_ID_7 377662 3913221 1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3931056-2.2.3.2.1 ATATTCATCATCAAACTACCGTCGCCGGAAAAA False NODE_4_length_411654_cov_48.8368_ID_7 395497 3931056 2.2.3.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3932517-2.2.3.2 CGGCGCATTGCCGACGACCACCACCACACGCAC False NODE_4_length_411654_cov_48.8368_ID_7 396958 3932517 2.2.3.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3939049-2.1.1.2 GAGATCATTGCGATTGCCATTGGTTCCGGCGCC False NODE_4_length_411654_cov_48.8368_ID_7 403490 3939049 2.1.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3943311-2.2.1.1.2 AGGATCGGCACATCCTGGATAGCCATATTATTG False NODE_4_length_411654_cov_48.8368_ID_7 407752 3943311 2.2.1.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2503823-2.2.3.1.2 TAAATGGATATAACGAGCCCCTCCTAAGGGCTA True NODE_8_length_161629_cov_42.8911_ID_15 12211 2503823 2.2.3.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2496132-2.1.1.2 GCTCCCTGCGCTCCGCCATGCGCACTAATTGTT True NODE_8_length_161629_cov_42.8911_ID_15 19902 2496132 2.1.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2482056-2.2.3.1 GGATCGGCCATTATTGCCTGCTGAACATAATAC True NODE_8_length_161629_cov_42.8911_ID_15 33978 2482056 2.2.3.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2455459-2.2.2.2.1.2 ATCACGAGCCTTACGCACGCCGGAACAGGTCTC True NODE_8_length_161629_cov_42.8911_ID_15 60575 2455459 2.2.2.2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +2438389-2.2 TAGGCCAGCCGCCAGGTAATACCCGCTGCATTT True NODE_8_length_161629_cov_42.8911_ID_15 77645 2438389 2.2 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2422397-2.1.1 CCCGCTGGTAAGCCGGCAGTTGCTAAGTTAAAT True NODE_8_length_161629_cov_42.8911_ID_15 93637 2422397 2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative2406889-2.2.2.2.1.2 TTGCCTATCACGATATGGGATGTCAGGGCGTGC True NODE_8_length_161629_cov_42.8911_ID_15 109145 2406889 2.2.2.2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3060368-2.2.3.2.1 ACCAGGCGGTATGATACAGTTCGACAATGTCCG False NODE_3_length_427905_cov_48.1477_ID_5 31346 3060368 2.2.3.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3062689-2.2.2.2.2.2 CCAGAACCGACCGCACGCAAAAGCTTCTGAACC False NODE_3_length_427905_cov_48.1477_ID_5 33667 3062689 2.2.2.2.2.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3082064-1.2 GACGTTCGCTATCCACCCCGCGTAAAAAGAGAT False NODE_3_length_427905_cov_48.1477_ID_5 52936 3082064 1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3090898-1.2 CGCATGGCTTTCCAGTTCAAGGATGTCCGCCTG False NODE_3_length_427905_cov_48.1477_ID_5 61770 3090898 1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3113857-1.2 TTCATGACGTCATCCCAGTCTTTTTCCGTGAAA False NODE_3_length_427905_cov_48.1477_ID_5 84729 3113857 1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3118525-2.2.3.1.3 CCTGGCCTCTAACATACTGGCCGCATAAGGCGC False NODE_3_length_427905_cov_48.1477_ID_5 89397 3118525 2.2.3.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3159204-2.2.1.1.3 CCGCCTCGCCAACCTGCGGCGGAGTCGCGAGCT False NODE_3_length_427905_cov_48.1477_ID_5 130070 3159204 2.2.1.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3187428-2.2.3.1.1 CTTTATCAGCGCGCAGTGTCCCATTCCATCATC False NODE_3_length_427905_cov_48.1477_ID_5 158294 3187428 2.2.3.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3200083-2.1 ACCCGGTCTACCGCAAAATGGAAAGCGATATGC False NODE_3_length_427905_cov_48.1477_ID_5 170949 3200083 2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3204925-2.2.3.1.5 CTCGCTGGCAAGCAGTGCGGGTACTATCGGCGG False NODE_3_length_427905_cov_48.1477_ID_5 175791 3204925 2.2.3.1.5 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +3212817-2.2.2.2 CAAAACTACGAATACGACGCAGCGGGCGACCGT False NODE_3_length_427905_cov_48.1477_ID_5 183683 3212817 2.2.2.2 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3230678-2.2.2.1.1.1 AGCGGTGCGCCAAACCACCCGGAATGATGAGTG False NODE_3_length_427905_cov_48.1477_ID_5 201544 3230678 2.2.2.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3233869-2.1.1.1.1 CAGCGCTGGTATGTGGCTGCACCATCGTCATTA False NODE_3_length_427905_cov_48.1477_ID_5 204735 3233869 2.1.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3254229-2.2.3.1.3 CGCCACCACGCGGTTAGCGTCACGCTGACATTC False NODE_3_length_427905_cov_48.1477_ID_5 225095 3254229 2.2.3.1.3 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3257074-2.2.1 CGGCAACCAGACCGACTACGCCGCCAAGCAGAC False NODE_3_length_427905_cov_48.1477_ID_5 227940 3257074 2.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3264474-2.2.2.1.1.1 AATGGCGCCGATCGTCGCCAGATAACCGTTGCC False NODE_3_length_427905_cov_48.1477_ID_5 235340 3264474 2.2.2.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3267927-2.2.2.2.2.1 AAAGAGAAATATGATGCCAGGCTGATACATGAC False NODE_3_length_427905_cov_48.1477_ID_5 238793 3267927 2.2.2.2.2.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3278067-1.1 TGTGAGTAAGTTGCGCGATATTCTGCTGGATTC False NODE_3_length_427905_cov_48.1477_ID_5 248933 3278067 1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3299717-2.2.3.1.4 ATGCCGGACAGCAGGCGAAACTCGAACCGGATA False NODE_3_length_427905_cov_48.1477_ID_5 270583 3299717 2.2.3.1.4 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3305400-2.1.1.1 CATCGTGAAGCAGAACAGACGCGCATTCTTGCT False NODE_3_length_427905_cov_48.1477_ID_5 276266 3305400 2.1.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +3324813-2.2.2.2 CAGATGAAGCGGGCGCAGGATAACTTCAAGGCC False NODE_3_length_427905_cov_48.1477_ID_5 295679 3324813 2.2.2.2 True SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3373069-2.2.2.2.1.1 CTCTCCAGAAGATGAAGCCCGTGATGCGGCGCA False NODE_3_length_427905_cov_48.1477_ID_5 344042 3373069 2.2.2.2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3408895-2.1.1 ACAGTAAAAACAGGATCTGCTGCGAGGCCAGAC False NODE_3_length_427905_cov_48.1477_ID_5 379868 3408895 2.1.1 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS +negative3436797-2.2.2.1.2 ATGCGGTATTCCTTGGCGTCGGCACCTATCAGT False NODE_3_length_427905_cov_48.1477_ID_5 407770 3436797 2.2.2.1.2 False SRR1002850_SMALL SRR1002850_SMALL.fasta heidelberg 0.5.0 PASS
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/SRR1002850_SMALL.fasta-results.tab Wed May 09 15:06:32 2018 -0400 @@ -0,0 +1,2 @@ +sample scheme scheme_version subtype all_subtypes tiles_matching_subtype are_subtypes_consistent inconsistent_subtypes n_tiles_matching_all n_tiles_matching_all_expected n_tiles_matching_positive n_tiles_matching_positive_expected n_tiles_matching_subtype n_tiles_matching_subtype_expected file_path qc_status qc_message +SRR1002850_SMALL heidelberg 0.5.0 2.2.2.2.1.4 2; 2.2; 2.2.2; 2.2.2.2; 2.2.2.2.1; 2.2.2.2.1.4 2154958-2.2.2.2.1.4; 1037658-2.2.2.2.1.4; 3785187-2.2.2.2.1.4 True 202 202 17 17 3 3 SRR1002850_SMALL.fasta PASS
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/SRR1002850_SMALL.fasta-tech_results.tab Wed May 09 15:06:32 2018 -0400 @@ -0,0 +1,2 @@ +sample subtype qc_status qc_message +SRR1002850_SMALL 2.2.2.2.1.4 PASS
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/SRR5646583_SMALL-match_results.tab Wed May 09 15:06:32 2018 -0400 @@ -0,0 +1,204 @@ +tilename seq freq refposition subtype is_pos_tile is_kmer_freq_okay sample scheme scheme_version qc_status qc_message +negative4642573-1.2 TACCAGGAAGTGCTGGAAGAGTTTAACGAACAT 62 4642573 1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +21097-2.2.1.1.1 GCAAATCGCGCCAGTCAAGTCCTCTTTTACCGT 42 21097 2.2.1.1.1 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3647258-2.2.2.2.2.1 TACGGGTAACTGTTATCGGTAACATTGTCCAAC 64 3647258 2.2.2.2.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3931056-2.2.3.2.1 ATATTCATCATCAAACTACCGTCGCCGGAAAAA 26 3931056 2.2.3.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3540924-2.2.2.2.2.2 ACCGCCGCTATTACAAGCGGCGGCTCTCAGTTT 52 3540924 2.2.2.2.2.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3062689-2.2.2.2.2.2 CCAGAACCGACCGCACGCAAAAGCTTCTGAACC 32 3062689 2.2.2.2.2.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3113857-1.2 TTCATGACGTCATCCCAGTCTTTTTCCGTGAAA 50 3113857 1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3011381-2.1.1.3 GTTGAGCCACAGCTTGCGCCAGAGCGGCGTTTG 38 3011381 2.1.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3230678-2.2.2.1.1.1 AGCGGTGCGCCAAACCACCCGGAATGATGAGTG 66 3230678 2.2.2.1.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2482056-2.2.3.1 GGATCGGCCATTATTGCCTGCTGAACATAATAC 28 2482056 2.2.3.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2045923-2.1.3 CGACATATTCCCGCACCGTGCCATGGCTCATCT 20 2045923 2.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1831783-2.2.2.1.2 TTTTCCGGGCTTATCGGCAACGCTATTCTGGCC 30 1831783 2.2.2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2217680-2.2.2.2.1 TCCCTGATTGCGGTGCTGATCCCGTTGCTCTTT 34 2217680 2.2.2.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2592097-2.2.1.1.2 TGCAAACTATCACGACGCGGCGCAAGAGTTTGT 68 2592097 2.2.1.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3523461-2.2.2.2.4 CGATTTTACCGCCAGCAGCTTCGATAGCAGCAC 54 3523461 2.2.2.2.4 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4157035-2.2.2.2.1.2 CCCAGGACTCCAGGCACATCTGCTCTTCTTCAC 56 4157035 2.2.2.2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3696399-2.2.2.2.2 TCATTTGTATAATAACCTATTGATCAGGCTAAT 90 3696399 2.2.2.2.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1840959-2.2.2.2.7 CACCATTGAGCCGGTAATAATGCCGACAAAGGC 30 1840959 2.2.2.2.7 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3802645-2.1 ATCGCGCCAGCCGCAGACGCTAACGTTCATTCC 38 3802645 2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3090898-1.2 CGCATGGCTTTCCAGTTCAAGGATGTCCGCCTG 42 3090898 1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4136269-2.2.2.2.2 CCGCTGCTGGAAGATGAAAAAGTGCGCAAAGTG 38 4136269 2.2.2.2.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3691258-2.2.2.1.1 GCACGTGACGTTTAGAGACGGAGTCCAGCTCAG 44 3691258 2.2.2.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2658490-2.2.1.1.3 GCTGGTCAGCCACAACGCTGACGCTATTTCTGA 48 2658490 2.2.1.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3819645-2.2.2.2.3 TCGAATCTGGATACCCGCGTCACCAATATCGAA 46 3819645 2.2.2.2.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1288160-2.2.2.2.4 GCGTGGTATCGTCCTGCGCCAGATTTTGTGGCG 50 1288160 2.2.2.2.4 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3939049-2.1.1.2 GAGATCATTGCGATTGCCATTGGTTCCGGCGCC 52 3939049 2.1.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4136928-2.1.2 GATTTTGGAGTATCGTGGTCTGGCGAAGCTAAA 34 4136928 2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4542157-2.1.1.1.1 TGGGTGATGCGTATAGTTGGGTAGGCTACGCGG 42 4542157 2.1.1.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3373069-2.2.2.2.1.1 CTCTCCAGAAGATGAAGCCCGTGATGCGGCGCA 44 3373069 2.2.2.2.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2048364-2.1 GGTCGCGACAGGCCGAGCCAGAACAGGAAAAGC 40 2048364 2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3233869-2.1.1.1.1 CAGCGCTGGTATGTGGCTGCACCATCGTCATTA 58 3233869 2.1.1.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2213229-2.1.1.3 ATTCCAGTTGTCGCCGCGACGACATTTCGCTAA 48 2213229 2.1.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4696391-2.2.3.2.1 TGCCGATATTATTGAGGTTCAACTGCTGGCCGT 46 4696391 2.2.3.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3827083-2.2.2.2.1 ACCGGGGAAATGCTGACCAGTTTCCGGGAACAC 50 3827083 2.2.2.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4178681-2.2.3.2 TCCACGCCCATCGCCTGTGCGATGCGAGCAAAA 28 4178681 2.2.3.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4079393-2.2.3.2.1 ACCAGGATCATGACGCGCCGCTATTGCAGCAGT 50 4079393 2.2.3.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3586333-2.2.2.2.2.1 CGCTGGGGACTGTTTGGGGAGAATAATCAGGAG 52 3586333 2.2.2.2.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3580227-2.2.2.2.5 GCACCGCATCCCAGGACGTTTTCAGCGCTATTT 28 3580227 2.2.2.2.5 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4579224-1.1 TGATGATGGTCGCCATCGTTTTGCTGTTTGTGT 40 4579224 1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4282538-2.1.3 TGTCTATCACTAAAGATCAAATCATTGAAGCAG 36 4282538 2.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3932517-2.2.3.2 CGGCGCATTGCCGACGACCACCACCACACGCAC 46 3932517 2.2.3.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3408895-2.1.1 ACAGTAAAAACAGGATCTGCTGCGAGGCCAGAC 40 3408895 2.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3943311-2.2.1.1.2 AGGATCGGCACATCCTGGATAGCCATATTATTG 58 3943311 2.2.1.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +157792-2.2.1.1.1 ACGGTACTTTTACCGCAGCCAATACCGCCGGTT 48 157792 2.2.1.1.1 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2741489-2.2.2.2.6 TATGAGCAAGCAACAGGTTAGAGTGTCTATGTT 64 2741489 2.2.2.2.6 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2561007-2.2.2.2.3 TGAGTCGTTTGAATCCGCTGGCGCTTATCTGAA 50 2561007 2.2.2.2.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2606626-2.2.2.2.1.1 TTCGATAAAATCTTTCCAGTTCCCCAGTTCACG 64 2606626 2.2.2.2.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2201150-2.2.2.2.7 GGTCGCGATCCTCTCCCGTGAACGTCAGGCTCA 36 2201150 2.2.2.2.7 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4525936-2.2.2.2.3 CGGTAACGGTGTTGTGCTGTCTCCGGCCGCGCT 52 4525936 2.2.2.2.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3204925-2.2.3.1.5 CTCGCTGGCAAGCAGTGCGGGTACTATCGGCGG 38 3204925 2.2.3.1.5 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4286359-2.2.3.2 TGAAGATCGTGAAGGTCTATCTGGCCGTTAAAC 76 4286359 2.2.3.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3118525-2.2.3.1.3 CCTGGCCTCTAACATACTGGCCGCATAAGGCGC 46 3118525 2.2.3.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4047770-2.2.2.1.2 TCCTGTTGTAATGTGGGTTCATTCGCACAGATA 72 4047770 2.2.2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3060368-2.2.3.2.1 ACCAGGCGGTATGATACAGTTCGACAATGTCCG 20 3060368 2.2.3.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2406889-2.2.2.2.1.2 TTGCCTATCACGATATGGGATGTCAGGGCGTGC 28 2406889 2.2.2.2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4738855-1.1 CACATCAAAACCCTGCGCGCTAAGCTACGCGCG 74 4738855 1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2496132-2.1.1.2 GCTCCCTGCGCTCCGCCATGCGCACTAATTGTT 48 2496132 2.1.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3299717-2.2.3.1.4 ATGCCGGACAGCAGGCGAAACTCGAACCGGATA 38 3299717 2.2.3.1.4 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3791096-2.2.2 AACTGCCGGTGGACGGCGGTTTCGACGATAACG 68 3791096 2.2.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2673994-2.2.2.2.7 GATGCCGACATTACCGGTAATGGTCGCCAGTAG 36 2673994 2.2.2.2.7 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3801966-2.1.1 TCAACCATATTTACGATCACGTTAAGCCCATCC 84 3801966 2.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4297704-2.2.3.1.2 CGGCTCCGATTCCGGGTGGTTGATGTTGGCGGG 24 4297704 2.2.3.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3264474-2.2.2.1.1.1 AATGGCGCCGATCGTCGCCAGATAACCGTTGCC 68 3264474 2.2.2.1.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3187428-2.2.3.1.1 CTTTATCAGCGCGCAGTGTCCCATTCCATCATC 60 3187428 2.2.3.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2069216-2.2.2 ATACTTAGGCTGTCAGGAACCCGTGAGGTAGTG 28 2069216 2.2.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3855172-2.2.3.1.3 CCGGTACTGATGGGTCCGCATACCTTTAACTTT 42 3855172 2.2.3.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2863936-2.2.3.2 AGTCGGCGCTAATTCTGCTGGCGACGGTGTACA 40 2863936 2.2.3.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3305400-2.1.1.1 CATCGTGAAGCAGAACAGACGCGCATTCTTGCT 54 3305400 2.1.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2154958-2.2.2.2.1.4 GGCGCGCCACGGTTACACCCCGGTGGTCAGCCG 34 2154958 2.2.2.2.1.4 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3811523-2.2.2.1.1 CACAATACTAATGAAGAGAAAGTACGCGACCAT 50 3811523 2.2.2.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3587211-2.2.1.1.2 TATTTCTCGCGAGACCGCGCGTGCCGCCCAGTC 52 3587211 2.2.1.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2778422-2.2.2.2.3 ATGAAGCTTGATTCCAGGGCGTGACCGTTGCAG 38 2778422 2.2.2.2.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4445342-2.2.2.2.5 TCCCGGGATTTTCAGGCAACCCTCCCGGTGATG 32 4445342 2.2.2.2.5 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3278067-1.1 TGTGAGTAAGTTGCGCGATATTCTGCTGGATTC 48 3278067 1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3822905-2.2.1.1.3 GAGTCGCCAGCGTATGTATCTCGTTCCGCCCGT 36 3822905 2.2.1.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4120499-2.1.1.3 GTCGTACCAGATGAAGCGAAGTGTGTATTTTGT 26 4120499 2.1.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +293728-2.2.1.1 GTTGAAACGACGCGCGATTTCAGAAAGCAGCGG 42 293728 2.2.1.1 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3867228-1.1 TTACCGTTTTGATAAACCAGTGTTACCGCTACG 50 3867228 1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3671709-2.2.3.1.5 TCAGCGAGCAACAACCGTGCCAAAGCCGATGAG 74 3671709 2.2.3.1.5 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1950957-2.2.2.2.2.2 TTTCCTTGCCCTAATCGCGCCCTACGGCTGGTC 32 1950957 2.2.2.2.2.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4086376-2.2.2.1.3 AGGTCTACCATCGCCCGTCGCGTTTCATCGGCG 52 4086376 2.2.2.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4215208-2.1.2 TAAGCGCAGCGCCATCAGACATTGATTGGCAAT 50 4215208 2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3553986-2.2.3.3 AGAAGCTATCCGACTGATCCTCAGTAACGATCC 38 3553986 2.2.3.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4013058-2.1.1.2 CGCGCAGGCGCCCAGCCCTCTTTGTCGGCGGAA 32 4013058 2.1.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3913221-1.3 CGGAGATCCCCAGATCCTGCGCCATCGGCGTCA 54 3913221 1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4166216-1.2 TTTTTGTACTGTGAAACGATGATGCTATACGCC 54 4166216 1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3267927-2.2.2.2.2.1 AAAGAGAAATATGATGCCAGGCTGATACATGAC 36 3267927 2.2.2.2.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3785187-2.2.2.2.1.4 TTAAAAAGCACCTCAGGGAATAGTCTTAATCCG 56 3785187 2.2.2.2.1.4 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3436797-2.2.2.1.2 ATGCGGTATTCCTTGGCGTCGGCACCTATCAGT 48 3436797 2.2.2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4540735-2.2.2.2.3 CGTAATACCGCGCGGGTTTTCACCGTAAGAACC 46 4540735 2.2.2.2.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1976727-2.1 TACTTTATCTTTGTACTTATTCCACAATACGGA 34 1976727 2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3159204-2.2.1.1.3 CCGCCTCGCCAACCTGCGGCGGAGTCGCGAGCT 40 3159204 2.2.1.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2785633-2.1 TCAGCCCGGAAGCGCTGCCGCAGCTTTATCAGT 28 2785633 2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4035893-2.1.2 GTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCA 52 4035893 2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4707754-1.3 CATCGCGAGCAGCCCGCGGGTATTCATCCAACC 62 4707754 1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3742501-2.1.1.3 CCTGCTGCCGCTGCACGATGGCAACCACTTCCC 36 3742501 2.1.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1462807-2.2.3 ATAATGTTGCCGACGGCGCACACAAACGCCACA 28 1462807 2.2.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4030144-2.2.3.2 TTCCTTTCTCTTTCGTTTGGTTATTAGTATGCC 42 4030144 2.2.3.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4145957-2.1 CGGTCGTCGTGGTAACGAGATCTTCAATTCTGC 58 4145957 2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2805778-2.2.2.2.3 TTCAATGAGTTGCAGGCTTTTTTGTTGCATGTG 66 2805778 2.2.2.2.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +607438-2.2.1 TCCAGCGGCATCATGATCACTTTGCTGTTATTC 62 607438 2.2.1 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3254229-2.2.3.1.3 CGCCACCACGCGGTTAGCGTCACGCTGACATTC 46 3254229 2.2.3.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2605132-2.2.2.2.1.5 TTCTACGCAACAGCAGACCCTGAAAGTCGTTGA 30 2605132 2.2.2.2.1.5 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1329594-2.1.1.2 AGGGGACGTTATTCGGCGACCAGCCACATATCA 34 1329594 2.1.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4101230-2.1.2 CTTTTATTGCCTCGCAGATCGTTTTTCCTGTCA 42 4101230 2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2904061-1.1 CTATAGGTGACAAAGCCGCGTTCAAACCAGGCG 54 2904061 1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3200083-2.1 ACCCGGTCTACCGCAAAATGGAAAGCGATATGC 36 3200083 2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2503823-2.2.3.1.2 TAAATGGATATAACGAGCCCCTCCTAAGGGCTA 38 2503823 2.2.3.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1697407-2.2.2.2.1.5 ACACTGCCCAGAATAAGCGACACACAGCGCGCC 40 1697407 2.2.2.2.1.5 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3212817-2.2.2.2 CAAAACTACGAATACGGCGCAGCGGGCGACCGT 26 3212817 2.2.2.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2801759-2.2.2.2.2.2 GACCTCGGTTCCCGCCCGCTGCTCGACGTGCTT 50 2801759 2.2.2.2.2.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4081360-2.2.2.2.1.5 TGCTGGTGGTTGAGCCGCCCTATGATCCTGAGT 28 4081360 2.2.2.2.1.5 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1689446-2.2.2.2.4 GGGCCGAAGACCTCGCGTTGCACGATGGCATCT 48 1689446 2.2.2.2.4 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1313808-2.1 CAATATGCGCGAAAAAGTGGTTGAGCATCCGCA 32 1313808 2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1649579-2.2.2.2.4 GCGCATCGCGCATTACTGATGAAATGCTGATGT 62 1649579 2.2.2.2.4 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2131791-2.2.3.1.3 GCTGGGCGAAATGATGCAGTTCACCACTTGCTC 26 2131791 2.2.3.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +691203-2.2.1.1 CAGTTTTACATCCTGCGAAATGCGCAGCGTCAA 38 691203 2.2.1.1 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4299778-2.2.3.2.1 CGTGCATACCGTGCTGGCCGGGTTTGTTGAAGT 54 4299778 2.2.3.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4327318-2.1.2 TTCCCGGCGAACCGTGTGGGTGACGACATCGAA 40 4327318 2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4499501-1.1 TTGGCCGCCTTCGGCGCCAGTTCAAACCAGGTT 48 4499501 1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3324813-2.2.2.2 CAGATGAAGCGGGCGCTGGATAACTTCAAGGCC 34 3324813 2.2.2.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2963935-2.1.3 TCATCCTGCTGCGGCAGTAAAATGTTCCCGGAT 60 2963935 2.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1534092-2.1.1.1 CCGTCGAGTGGGGGGCAATAGCGATAACCGTCC 24 1534092 2.1.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2878560-2.1.1.3 AGCGGGTATCGGCGGCGCCGTCTCAAACCGTAG 42 2878560 2.1.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2693425-2.2.2.2.3 GAGTAATTTGGTCAACTATTTACTTGAGTAAAT 38 2693425 2.2.2.2.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative862828-2.1 CGCCAAGTCTGGCACCTAACGGCACGATGGTAA 24 862828 2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative908618-2.2.2.1.1.1 TTGACCACGCGCTGCGCGGCTGGCGGGCGTTTC 32 908618 2.2.2.1.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4581051-2.2.1.2 TGACCCTCTTTACGCTTAAACGCCAGCCCACCG 28 4581051 2.2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +944885-2.2.1.1.1 GTTTACGTGTTGACCCTGGCATCCTTTCTCCTG 20 944885 2.2.1.1.1 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2877590-2.2.1.2 GTACCGCCAGTCCGGCCTGATTCGCTTTTGCTA 52 2877590 2.2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2934077-2.2.2.2.1.3 AATTAACCACATTGTTGCGAGGGATACTATGAC 58 2934077 2.2.2.2.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2663535-2.2.3.2 AGATTCGCCGCGCAGCGACAACGAAGGCATATC 42 2663535 2.2.3.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +1047714-2.2.1.1.1 GCGAACTGGCGAAACGCCTTGGCGTGGAACAAC 44 1047714 2.2.1.1.1 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1856421-2.1.1.1 GTTTGCGCAGCAGGCAGCCCCTGGCGAGCGGCT 50 1856421 2.1.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2293563-2.2.2.1.2 ACCGGTCTCGTACATCGCAGCAATGATCTCATC 56 2293563 2.2.2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3082064-1.2 GACGTTCGCTATCCACCCCGCGTAAAAAGAGAT 26 3082064 1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1825773-2.2.2.2.2 CATCCCGGTTCATAGCGGCTCCGCTACGCTAAA 34 1825773 2.2.2.2.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +1983064-2.2.1.1.1.1 TCCAGCATATCGCCCAAGCGACTGAACGCAGGC 46 1983064 2.2.1.1.1.1 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2455459-2.2.2.2.1.2 ATCACGAGCCTTACGCACGCCGGAACAGGTCTC 50 2455459 2.2.2.2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1603329-2.2.2.2.1.1 ATTGGCCAGGGCAAAGTCGCTGACTATATTCCG 38 1603329 2.2.2.2.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2778621-1.1 TTTATCTACCCGGGAAGCCTGGCGGCATCATCC 32 2778621 1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +2438389-2.2 TAGGCCAGCCGCCAGGTAATACCCGCTGCATTT 46 2438389 2.2 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1910623-2.2.3.3 GCTCCGATTTTTGCCTGATAATTATCCAATTAC 22 1910623 2.2.3.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +2531225-2 TTCTTGGCTTAGTGCTAGTAGTGACGCGCGACG 32 2531225 2 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4472427-1.3 GAGCTTTACCCCTGGCGCGATCGCGGACATATT 36 4472427 1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1760974-2.2.3.1.3 TCGCGATGCGCAGGTCGGAGAAATCGCGCTAAA 44 1760974 2.2.3.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2422397-2.1.1 CCCGCTGGTAAGCCGGCAGTTGCTAAGTTAAAT 42 2422397 2.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +2802706-2.2.1.1 AACAGCGCTATTCCCCTTTCCACCGGCAGTTTT 58 2802706 2.2.1.1 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3012157-2.2.2.2.3 ATTCCACCAGCTCTGACGTACTCGCAGCACGCT 34 3012157 2.2.2.2.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2239956-1.2 CCAGGAAGCCATCATCGCTGCGGAACGCGCCGG 34 2239956 1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +2928609-2.2.1 GTGAAGATAAGCCGCTAAAGTATCCCCATATGT 42 2928609 2.2.1 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative3686624-2.2.2.2.5 CCGAAAGAAGACTAACGTCCCAGCGCTTTGCCG 28 3686624 2.2.2.2.5 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +3257074-2.2.1 CGGCAACCAGACCGACCACGCCGCCAAGCAGAC 34 3257074 2.2.1 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative4516469-2.2.3.1.1 TTTACTACGCTGCGGCGTATTGTTAACCCTGAT 60 4516469 2.2.3.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +3479768-2.2 CGCCTTGCCGCCGCCGTGCGCCACACAGGTCAG 54 3479768 2.2 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2283825-2.1.1 TTGAGTGTAACTTCTCTTGCCCGCAGATGACCT 30 2283825 2.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +3677767-2 CTGGAGCAATTTAACCCCCCGTTCGGCCAACTG 52 3677767 2 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +3766668-2.2 GGCCGTACCGTCGGTCTTGCCCAAAAGATAGTC 62 3766668 2.2 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +3864871-2.2.1.1 CCCTGACCTGGTTACTAATATTCAGAGCAGCTT 46 3864871 2.2.1.1 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +4211912-2.2.1.1.1.1 GGAGTGCCGAATCAAACTTCCAGCGCATTGTCC 44 4211912 2.2.1.1.1.1 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +4241351-2.2 GGGATTACGTCCATAAAGAATCCATGTTTTTTG 40 4241351 2.2 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2676021-2.2.3.2 AATTGCCCCACCACAGGCGTGCCGTCGGGTCTG 22 2676021 2.2.3.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1276017-2.1 TGCTTGATTTGGGGGCCAACGTCGACTGTGACA 24 1276017 2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +4744778-2.2 CTGCTTTAATTTTTGATCATGAGTTGGTGACGT 66 4744778 2.2 True True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative2981-2.2.3.1.4 ACTGCCGCCGGAGCCGCGTGAAAATATTGTTTA 34 2981 2.2.3.1.4 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative42232-2.2.2.2.2.2 CCTGAAAAAGCGTTCCCTGCCTGCCTGGAAGAG 64 42232 2.2.2.2.2.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative64709-2.1.3 CGCATGGTGGCAATTGCGCTGGCGGCATTTGAT 56 64709 2.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative92666-1.3 TGCAGTGGTACAGCGTCCCTCCTTTACTCAAAT 32 92666 1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative107801-2.2.1.2 TAGCGTTTTTTACTGCCAGTATCCGCGCCGCGG 32 107801 2.2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative160366-2.2.1.2 CAGTATCTCTTCAAAGGACGTCATGCCTTGCTC 46 160366 2.2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative167020-2.2.2.1.1.1 TACGATCGGCAAGCGCGCCCATCACCGGATCGG 28 167020 2.2.2.1.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative176708-2.2.2.2.6 AATAGCGAGCTAATTATGAGGTTTGATATATGA 42 176708 2.2.2.2.6 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative198398-2.2.2.1.1.1 GTACCGTCAACGGTAATATCCGCCAGCGTCGGC 30 198398 2.2.2.1.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative202001-1.1 CTGGAAGAGGCGGAAATGCTGTGCCGCAATATC 40 202001 1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative205838-2.1.1.1.1 CTGTTCGCTGCCGTCGGTTTCTTTTACCGTCAC 32 205838 2.1.1.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative227831-2.2.3.2.1 TCCCGGCGAATTTACCGTGCAGGCCAATAGCAT 40 227831 2.2.3.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative239152-2.2.2.2.2.1 TTCCGTCGATGTCACCCATTCCCGTGCGACGCT 20 239152 2.2.2.2.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative271435-2.2.1.1.3 TCGGGTGCAAATGGGATGGTAAGGAGTTTATTG 50 271435 2.2.1.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative467662-2.2.3.1.2 CTAACTTATGTCATAACGCCGTTGACCGCTGGC 26 467662 2.2.3.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative484993-2.2.2.2.1.2 CGGGAATGGTTAAAGTCTGCGGATATGGCGCTT 30 484993 2.2.2.2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative489687-2.2.3.2.1 CCTTGTCGTTAAATCCAGGCGGTATAGTAACGA 48 489687 2.2.3.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative508759-2.2.2.2.1.3 CCTGGTGATTTCCAGCCAGAGCGGTAATCAACT 38 508759 2.2.2.2.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative573259-2.2.2.2.5 ACCACAACGTCTGGCGGTACGTTTTTTATCACC 26 573259 2.2.2.2.5 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative600350-2.1.2 GTCGGAAAATAAAAAACAGGTGAATTACGTACC 40 600350 2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative600783-1.1 AGCGGCGGCGGTATTCGCGACTCGATTGAGGCG 46 600783 1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative649988-2.2.2.1 GGAGCCGACAGGATGCCGAAACCGGGTGTGTGT 28 649988 2.2.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative691203-2.2.1.1 CAGTTTTACATCCTGCAAAATGCGCAGCGTCAA 2 691203 2.2.1.1 False False SRR5646583_SMALL heidelberg 0.5.0 PASS +negative720751-2.2.1.1.2 ATGGCCATCTGCATACCTGGGGCTTTAACTATA 30 720751 2.2.1.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative775920-2.2.2.2 GTTCAGGTGCTACCGATGATCGTTTTTGGTGCG 46 775920 2.2.2.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative842143-2.1.1.1.1 TGCCCAGCTCTTTCAGCACTTCGTGGCAGGTTT 30 842143 2.1.1.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative848800-2.2.3.1 TCGTTATCAACAACCAGGTGGGTTTCACCACCT 50 848800 2.2.3.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative869993-2.2.1.1.3 CGGACTACTGAATCCCAGGTTCATCGCGAACTG 34 869993 2.2.1.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1036874-2.2.2.1 GACAATGAGCAGAATTGTAGGGAATTTACAGAC 40 1036874 2.2.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1037658-2.2.2.2.1.4 GATGTGTTTGAACAGTTTAATGCCGCCGTGCAA 56 1037658 2.2.2.2.1.4 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1037736-2.2.2.1.1 GACTACCTGTTGAAAACCCGTGTACCGGATATG 52 1037736 2.2.2.1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1049933-1.1 CCAGCTAACGCGTTGACGCGCATTCGGCCTGCA 30 1049933 1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1052031-2.2.2.2.1.3 ACCGTCGTTGCCTTGCAGGGGCTGACGCTGGCA 30 1052031 2.2.2.2.1.3 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1061770-2.2.2.1 AAAATAAAGACGTTAAGCCGGGGTTAAGCATTC 24 1061770 2.2.2.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1062011-2.1.2 TGTTGTGTGACGCATGCCGCATTTTCTCCTCGC 34 1062011 2.1.2 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1091342-2.2.3.1 TTAAAACCAATCTGGGCATAAGTCTGGTCGGCA 20 1091342 2.2.3.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1155229-2.2.3.1.5 GCTGACTGACGATCTGACCCACGTACAAATCAA 40 1155229 2.2.3.1.5 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1174327-2.2.2.2.6 CCATTAACATACCGCCCAGGAAAGACATATCCT 36 1174327 2.2.2.2.6 False True SRR5646583_SMALL heidelberg 0.5.0 PASS +negative1193219-1.1 GGTACAGATTAAGCAACTGCTCGACGTCGGCGC 32 1193219 1.1 False True SRR5646583_SMALL heidelberg 0.5.0 PASS
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/SRR5646583_SMALL-results.tab Wed May 09 15:06:32 2018 -0400 @@ -0,0 +1,2 @@ +sample scheme scheme_version subtype all_subtypes tiles_matching_subtype are_subtypes_consistent inconsistent_subtypes n_tiles_matching_all n_tiles_matching_all_expected n_tiles_matching_positive n_tiles_matching_positive_expected n_tiles_matching_subtype n_tiles_matching_subtype_expected file_path avg_tile_coverage qc_status qc_message +SRR5646583_SMALL heidelberg 0.5.0 2.2.1.1.1.1 2; 2.2; 2.2.1; 2.2.1.1; 2.2.1.1.1; 2.2.1.1.1.1 1983064-2.2.1.1.1.1; 4211912-2.2.1.1.1.1 True 202 202 20 20 2 2 ['SRR5646583_SMALL_1.fastq', 'SRR5646583_SMALL_2.fastq'] 42.631 PASS
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/SRR5646583_SMALL-tech_results.tab Wed May 09 15:06:32 2018 -0400 @@ -0,0 +1,2 @@ +sample subtype avg_tile_coverage qc_status qc_message +SRR5646583_SMALL 2.2.1.1.1.1 42.631 PASS
--- a/test-data/match_results.tab Fri Apr 20 10:44:35 2018 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,203 +0,0 @@ -tilename seq is_revcomp contig_id match_index refposition subtype is_pos_tile sample file_path scheme scheme_version qc_status qc_message -2154958-2.2.2.2.1.4 GGCGCGCCACGGTTACTCCCCGGTGGTCAGCCG True NODE_1_length_726282_cov_40.4705_ID_1 13732 2154958 2.2.2.2.1.4 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2131791-2.2.3.1.3 GCTGGGCGAAATGATGCAGTTCACCACTTGCTC True NODE_1_length_726282_cov_40.4705_ID_1 36900 2131791 2.2.3.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -2069216-2.2.2 ATACTTAGGCTGTCAGTAACCCGTGAGGTAGTG True NODE_1_length_726282_cov_40.4705_ID_1 99475 2069216 2.2.2 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2048364-2.1 GGTCGCGACAGGCCGAGCCAGAACAGGAAAAGC True NODE_1_length_726282_cov_40.4705_ID_1 120327 2048364 2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2045923-2.1.3 CGACATATTCCCGCACCGTGCCATGGCTCATCT True NODE_1_length_726282_cov_40.4705_ID_1 122768 2045923 2.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1983064-2.2.1.1.1.1 TCCAGCATATCGCCCAGGCGACTGAACGCAGGC True NODE_1_length_726282_cov_40.4705_ID_1 185627 1983064 2.2.1.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1976727-2.1 TACTTTATCTTTGTACTTATTCCACAATACGGA True NODE_1_length_726282_cov_40.4705_ID_1 191964 1976727 2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1950957-2.2.2.2.2.2 TTTCCTTGCCCTAATCGCGCCCTACGGCTGGTC True NODE_1_length_726282_cov_40.4705_ID_1 217734 1950957 2.2.2.2.2.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1910623-2.2.3.3 GCTCCGATTTTTGCCTGATAATTATCCAATTAC True NODE_1_length_726282_cov_40.4705_ID_1 258068 1910623 2.2.3.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1856421-2.1.1.1 GTTTGCGCAGCAGGCAGCCCCTGGCGAGCGGCT True NODE_1_length_726282_cov_40.4705_ID_1 312270 1856421 2.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1840959-2.2.2.2.7 CACCATTGAGCCGGTAATAATGCCGACAAAGGC True NODE_1_length_726282_cov_40.4705_ID_1 327846 1840959 2.2.2.2.7 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1831783-2.2.2.1.2 TTTTCCGGGCTTATCGGCAACGCTATTCTGGCC True NODE_1_length_726282_cov_40.4705_ID_1 337022 1831783 2.2.2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1825773-2.2.2.2.2 CATCCCGGTTCATAGCGGCTCCGCTACGCTAAA True NODE_1_length_726282_cov_40.4705_ID_1 343032 1825773 2.2.2.2.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1760974-2.2.3.1.3 TCGCGATGCGCAGGTCGGAGAAATCGCGCTAAA True NODE_1_length_726282_cov_40.4705_ID_1 407831 1760974 2.2.3.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1697407-2.2.2.2.1.5 ACACTGCCCAGAATAAGCGACACACAGCGCGCC True NODE_1_length_726282_cov_40.4705_ID_1 471398 1697407 2.2.2.2.1.5 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1689446-2.2.2.2.4 GGGCCGAAGACCTCGCGTTGCACGATGGCATCT True NODE_1_length_726282_cov_40.4705_ID_1 479359 1689446 2.2.2.2.4 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1649579-2.2.2.2.4 GCGCATCGCGCATTACTGATGAAATGCTGATGT True NODE_1_length_726282_cov_40.4705_ID_1 519226 1649579 2.2.2.2.4 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1603329-2.2.2.2.1.1 ATTGGCCAGGGCAAAGTCGCTGACTATATTCCG True NODE_1_length_726282_cov_40.4705_ID_1 565476 1603329 2.2.2.2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1534092-2.1.1.1 CCGTCGAGTGGGGGGCAATAGCGATAACCGTCC True NODE_1_length_726282_cov_40.4705_ID_1 634713 1534092 2.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1462807-2.2.3 ATAATGTTGCCGACGGCGCACACAAACGCCACA True NODE_1_length_726282_cov_40.4705_ID_1 705998 1462807 2.2.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4499501-1.1 TTGGCCGCCTTCGGCGCCAGTTCAAACCAGGTT True NODE_13_length_118043_cov_48.4501_ID_25 13603 4499501 1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4472427-1.3 GAGCTTTACCCCTGGCGCGATCGCGGACATATT True NODE_13_length_118043_cov_48.4501_ID_25 40677 4472427 1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4445342-2.2.2.2.5 TCCCGGGATTTTCAGGCAACCCTCCCGGTGATG True NODE_13_length_118043_cov_48.4501_ID_25 67762 4445342 2.2.2.2.5 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative944885-2.2.1.1.1 GTTTACGTGTTGACCCCGGCATCCTTTCTCCTG True NODE_9_length_160411_cov_40.0167_ID_17 81029 944885 2.2.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative908618-2.2.2.1.1.1 TTGACCACGCGCTGCGCGGCTGGCGGGCGTTTC True NODE_9_length_160411_cov_40.0167_ID_17 117296 908618 2.2.2.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative869993-2.2.1.1.3 CGGACTACTGAATCCCAGGTTCATCGCGAACTG True NODE_9_length_160411_cov_40.0167_ID_17 155916 869993 2.2.1.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative293728-2.2.1.1 GTTGAAACGACGCGCGGTTTCAGAAAGCAGCGG True NODE_5_length_234682_cov_47.2597_ID_9 1908 293728 2.2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative271435-2.2.1.1.3 TCGGGTGCAAATGGGATGGTAAGGAGTTTATTG True NODE_5_length_234682_cov_47.2597_ID_9 24201 271435 2.2.1.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative239152-2.2.2.2.2.1 TTCCGTCGATGTCACCCATTCCCGTGCGACGCT True NODE_5_length_234682_cov_47.2597_ID_9 56484 239152 2.2.2.2.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative227831-2.2.3.2.1 TCCCGGCGAATTTACCGTGCAGGCCAATAGCAT True NODE_5_length_234682_cov_47.2597_ID_9 67805 227831 2.2.3.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative205838-2.1.1.1.1 CTGTTCGCTGCCGTCGGTTTCTTTTACCGTCAC True NODE_5_length_234682_cov_47.2597_ID_9 89798 205838 2.1.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative202001-1.1 CTGGAAGAGGCGGAAATGCTGTGCCGCAATATC True NODE_5_length_234682_cov_47.2597_ID_9 93635 202001 1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative198398-2.2.2.1.1.1 GTACCGTCAACGGTAATATCCGCCAGCGTCGGC True NODE_5_length_234682_cov_47.2597_ID_9 97238 198398 2.2.2.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative176708-2.2.2.2.6 AATAGCGAGCTAATTATGAGGTTTGATATATGA True NODE_5_length_234682_cov_47.2597_ID_9 118928 176708 2.2.2.2.6 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative167020-2.2.2.1.1.1 TACGATCGGCAAGCGCGCCCATCACCGGATCGG True NODE_5_length_234682_cov_47.2597_ID_9 128615 167020 2.2.2.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative160366-2.2.1.2 CAGTATCTCTTCAAAGGACGTCATGCCTTGCTC True NODE_5_length_234682_cov_47.2597_ID_9 135269 160366 2.2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative157792-2.2.1.1.1 ACGGTACTTTTACCGCTGCCAATACCGCCGGTT True NODE_5_length_234682_cov_47.2597_ID_9 137843 157792 2.2.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative107801-2.2.1.2 TAGCGTTTTTTACTGCCAGTATCCGCGCCGCGG True NODE_5_length_234682_cov_47.2597_ID_9 187834 107801 2.2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative92666-1.3 TGCAGTGGTACAGCGTCCCTCCTTTACTCAAAT True NODE_5_length_234682_cov_47.2597_ID_9 202969 92666 1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative64709-2.1.3 CGCATGGTGGCAATTGCGCTGGCGGCATTTGAT True NODE_5_length_234682_cov_47.2597_ID_9 230926 64709 2.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2293563-2.2.2.1.2 ACCGGTCTCGTACATCGCAGCAATGATCTCATC True NODE_7_length_178659_cov_40.3043_ID_13 54759 2293563 2.2.2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2283825-2.1.1 TTGAGTGTAACTTCTCTTGCCCGCAGATGACCT True NODE_7_length_178659_cov_40.3043_ID_13 64497 2283825 2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2239956-1.2 CCAGGAAGCCATCATCGCTGCGGAACGCGCCGG True NODE_7_length_178659_cov_40.3043_ID_13 108367 2239956 1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -2217680-2.2.2.2.1 TCCCTGATTGCGGTGCAGATCCCGTTGCTCTTT True NODE_7_length_178659_cov_40.3043_ID_13 130643 2217680 2.2.2.2.1 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2213229-2.1.1.3 ATTCCAGTTGTCGCCGCGACGACATTTCGCTAA True NODE_7_length_178659_cov_40.3043_ID_13 135094 2213229 2.1.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2201150-2.2.2.2.7 GGTCGCGATCCTCTCCCGTGAACGTCAGGCTCA True NODE_7_length_178659_cov_40.3043_ID_13 147173 2201150 2.2.2.2.7 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1193219-1.1 GGTACAGATTAAGCAACTGCTCGACGTCGGCGC True NODE_18_length_90852_cov_41.5013_ID_35 36935 1193219 1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1174327-2.2.2.2.6 CCATTAACATACCGCCCAGGAAAGACATATCCT True NODE_18_length_90852_cov_41.5013_ID_35 55819 1174327 2.2.2.2.6 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1155229-2.2.3.1.5 GCTGACTGACGATCTGACCCACGTACAAATCAA True NODE_18_length_90852_cov_41.5013_ID_35 74917 1155229 2.2.3.1.5 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2904061-1.1 CTATAGGTGACAAAGCCGCGTTCAAACCAGGCG False NODE_12_length_131107_cov_44.0771_ID_23 6138 2904061 1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2928609-2.2.1 GTGAAGATAAGCCGCTGAAGTATCCCCATATGT False NODE_12_length_131107_cov_44.0771_ID_23 30686 2928609 2.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2934077-2.2.2.2.1.3 AATTAACCACATTGTTGCGAGGGATACTATGAC False NODE_12_length_131107_cov_44.0771_ID_23 36154 2934077 2.2.2.2.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2963935-2.1.3 TCATCCTGCTGCGGCAGTAAAATGTTCCCGGAT False NODE_12_length_131107_cov_44.0771_ID_23 66012 2963935 2.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3011381-2.1.1.3 GTTGAGCCACAGCTTGCGCCAGAGCGGCGTTTG False NODE_12_length_131107_cov_44.0771_ID_23 113457 3011381 2.1.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3012157-2.2.2.2.3 ATTCCACCAGCTCTGACGTACTCGCAGCACGCT False NODE_12_length_131107_cov_44.0771_ID_23 114233 3012157 2.2.2.2.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2741489-2.2.2.2.6 TATGAGCAAGCAACAGGTTAGAGTGTCTATGTT True NODE_10_length_158464_cov_45.2944_ID_19 16613 2741489 2.2.2.2.6 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2693425-2.2.2.2.3 GAGTAATTTGGTCAACTATTTACTTGAGTAAAT True NODE_10_length_158464_cov_45.2944_ID_19 64677 2693425 2.2.2.2.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2676021-2.2.3.2 AATTGCCCCACCACAGGCGTGCCGTCGGGTCTG True NODE_10_length_158464_cov_45.2944_ID_19 82081 2676021 2.2.3.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2673994-2.2.2.2.7 GATGCCGACATTACCGGTAATGGTCGCCAGTAG True NODE_10_length_158464_cov_45.2944_ID_19 84108 2673994 2.2.2.2.7 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2663535-2.2.3.2 AGATTCGCCGCGCAGCGACAACGAAGGCATATC True NODE_10_length_158464_cov_45.2944_ID_19 94567 2663535 2.2.3.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2658490-2.2.1.1.3 GCTGGTCAGCCACAACGCTGACGCTATTTCTGA True NODE_10_length_158464_cov_45.2944_ID_19 99612 2658490 2.2.1.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2606626-2.2.2.2.1.1 TTCGATAAAATCTTTCCAGTTCCCCAGTTCACG True NODE_10_length_158464_cov_45.2944_ID_19 150909 2606626 2.2.2.2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2605132-2.2.2.2.1.5 TTCTACGCAACAGCAGACCCTGAAAGTCGTTGA True NODE_10_length_158464_cov_45.2944_ID_19 152403 2605132 2.2.2.2.1.5 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative42232-2.2.2.2.2.2 CCTGAAAAAGCGTTCCCTGCCTGCCTGGAAGAG True NODE_6_length_203546_cov_46.7874_ID_11 17607 42232 2.2.2.2.2.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative21097-2.2.1.1.1 GCAAATCGCGCCAGTCGAGTCCTCTTTTACCGT True NODE_6_length_203546_cov_46.7874_ID_11 38742 21097 2.2.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2981-2.2.3.1.4 ACTGCCGCCGGAGCCGCGTGAAAATATTGTTTA True NODE_6_length_203546_cov_46.7874_ID_11 56858 2981 2.2.3.1.4 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -4744778-2.2 CTGCTTTAATTTTTGATCATGAGTTGGTGACGT True NODE_6_length_203546_cov_46.7874_ID_11 66508 4744778 2.2 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4738855-1.1 CACATCAAAACCCTGCGCGCTAAGCTACGCGCG True NODE_6_length_203546_cov_46.7874_ID_11 72431 4738855 1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4707754-1.3 CATCGCGAGCAGCCCGCGGGTATTCATCCAACC True NODE_6_length_203546_cov_46.7874_ID_11 103532 4707754 1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4696391-2.2.3.2.1 TGCCGATATTATTGAGGTTCAACTGCTGGCCGT True NODE_6_length_203546_cov_46.7874_ID_11 114895 4696391 2.2.3.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4642573-1.2 TACCAGGAAGTGCTGGAAGAGTTTAACGAACAT True NODE_6_length_203546_cov_46.7874_ID_11 168713 4642573 1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -3479768-2.2 CGCCTTGCCGCCGCCGTGCGCCACACAGGTCAG True NODE_26_length_45055_cov_50.2073_ID_51 23364 3479768 2.2 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1329594-2.1.1.2 AGGGGACGTTATTCGGCGACCAGCCACATATCA True NODE_14_length_117769_cov_39.6027_ID_27 113287 1329594 2.1.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4030144-2.2.3.2 TTCCTTTCTCTTTCGTTTGGTTATTAGTATGCC True NODE_22_length_77187_cov_52.2229_ID_43 378 4030144 2.2.3.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4013058-2.1.1.2 CGCGCAGGCGCCCAGCCCTCTTTGTCGGCGGAA True NODE_22_length_77187_cov_52.2229_ID_43 17464 4013058 2.1.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative467662-2.2.3.1.2 CTAACTTATGTCATAACGCCGTTGACCGCTGGC False NODE_2_length_512016_cov_46.4737_ID_3 166641 467662 2.2.3.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative484993-2.2.2.2.1.2 CGGGAATGGTTAAAGTCTGCGGATATGGCGCTT False NODE_2_length_512016_cov_46.4737_ID_3 183972 484993 2.2.2.2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative489687-2.2.3.2.1 CCTTGTCGTTAAATCCAGGCGGTATAGTAACGA False NODE_2_length_512016_cov_46.4737_ID_3 188666 489687 2.2.3.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative508759-2.2.2.2.1.3 CCTGGTGATTTCCAGCCAGAGCGGTAATCAACT False NODE_2_length_512016_cov_46.4737_ID_3 207737 508759 2.2.2.2.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative573259-2.2.2.2.5 ACCACAACGTCTGGCGGTACGTTTTTTATCACC False NODE_2_length_512016_cov_46.4737_ID_3 272237 573259 2.2.2.2.5 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative600350-2.1.2 GTCGGAAAATAAAAAACAGGTGAATTACGTACC False NODE_2_length_512016_cov_46.4737_ID_3 299336 600350 2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative600783-1.1 AGCGGCGGCGGTATTCGCGACTCGATTGAGGCG False NODE_2_length_512016_cov_46.4737_ID_3 299769 600783 1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative607438-2.2.1 TCCAGCGGCATCATGACCACTTTGCTGTTATTC False NODE_2_length_512016_cov_46.4737_ID_3 306424 607438 2.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative649988-2.2.2.1 GGAGCCGACAGGATGCCGAAACCGGGTGTGTGT False NODE_2_length_512016_cov_46.4737_ID_3 348974 649988 2.2.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative691203-2.2.1.1 CAGTTTTACATCCTGCAAAATGCGCAGCGTCAA False NODE_2_length_512016_cov_46.4737_ID_3 390189 691203 2.2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative720751-2.2.1.1.2 ATGGCCATCTGCATACCTGGGGCTTTAACTATA False NODE_2_length_512016_cov_46.4737_ID_3 419737 720751 2.2.1.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -775920-2.2.2.2 GTTCAGGTGCTACCGAGGATCGTTTTTGGTGCG False NODE_2_length_512016_cov_46.4737_ID_3 474906 775920 2.2.2.2 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4516469-2.2.3.1.1 TTTACTACGCTGCGGCGTATTGTTAACCCTGAT False NODE_17_length_93595_cov_48.0081_ID_33 2963 4516469 2.2.3.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4525936-2.2.2.2.3 CGGTAACGGTGTTGTGCTGTCTCCGGCCGCGCT False NODE_17_length_93595_cov_48.0081_ID_33 12430 4525936 2.2.2.2.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4540735-2.2.2.2.3 CGTAATACCGCGCGGGTTTTCACCGTAAGAACC False NODE_17_length_93595_cov_48.0081_ID_33 27229 4540735 2.2.2.2.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4542157-2.1.1.1.1 TGGGTGATGCGTATAGTTGGGTAGGCTACGCGG False NODE_17_length_93595_cov_48.0081_ID_33 28651 4542157 2.1.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4579224-1.1 TGATGATGGTCGCCATCGTTTTGCTGTTTGTGT False NODE_17_length_93595_cov_48.0081_ID_33 65718 4579224 1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4581051-2.2.1.2 TGACCCTCTTTACGCTTAAACGCCAGCCCACCG False NODE_17_length_93595_cov_48.0081_ID_33 67545 4581051 2.2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2878560-2.1.1.3 AGCGGGTATCGGCGGCGCCGTCTCAAACCGTAG True NODE_20_length_83804_cov_41.1851_ID_39 19449 2878560 2.1.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2877590-2.2.1.2 GTACCGCCAGTCCGGCCTGATTCGCTTTTGCTA True NODE_20_length_83804_cov_41.1851_ID_39 20419 2877590 2.2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2863936-2.2.3.2 AGTCGGCGCTAATTCTGCTGGCGACGGTGTACA True NODE_20_length_83804_cov_41.1851_ID_39 34073 2863936 2.2.3.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2592097-2.2.1.1.2 TGCAAACTATCACGACGCGGCGCAAGAGTTTGT True NODE_23_length_56003_cov_43.6933_ID_45 6889 2592097 2.2.1.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2561007-2.2.2.2.3 TGAGTCGTTTGAATCCGCTGGCGCTTATCTGAA True NODE_23_length_56003_cov_43.6933_ID_45 37979 2561007 2.2.2.2.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2805778-2.2.2.2.3 TTCAATGAGTTGCAGGCTTTTTTGTTGCATGTG True NODE_25_length_50957_cov_44.8346_ID_49 8349 2805778 2.2.2.2.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2802706-2.2.1.1 AACAGCGCTATTCCCCGTTCCACCGGCAGTTTT True NODE_25_length_50957_cov_44.8346_ID_49 11421 2802706 2.2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2801759-2.2.2.2.2.2 GACCTCGGTTCCCGCCCGCTGCTCGACGTGCTT True NODE_25_length_50957_cov_44.8346_ID_49 12368 2801759 2.2.2.2.2.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2785633-2.1 TCAGCCCGGAAGCGCTGCCGCAGCTTTATCAGT True NODE_25_length_50957_cov_44.8346_ID_49 28494 2785633 2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2778621-1.1 TTTATCTACCCGGGAAGCCTGGCGGCATCATCC True NODE_25_length_50957_cov_44.8346_ID_49 35506 2778621 1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2778422-2.2.2.2.3 ATGAAGCTTGATTCCAGGGCGTGACCGTTGCAG True NODE_25_length_50957_cov_44.8346_ID_49 35705 2778422 2.2.2.2.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4299778-2.2.3.2.1 CGTGCATACCGTGCTGGCCGGGTTTGTTGAAGT True NODE_28_length_31385_cov_55.2199_ID_55 10644 4299778 2.2.3.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4297704-2.2.3.1.2 CGGCTCCGATTCCGGGTGGTTGATGTTGGCGGG True NODE_28_length_31385_cov_55.2199_ID_55 12718 4297704 2.2.3.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4286359-2.2.3.2 TGAAGATCGTGAAGGTCTATCTGGCCGTTAAAC True NODE_28_length_31385_cov_55.2199_ID_55 24063 4286359 2.2.3.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4282538-2.1.3 TGTCTATCACTAAAGATCAAATCATTGAAGCAG True NODE_28_length_31385_cov_55.2199_ID_55 27884 4282538 2.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -2531225-2 TTCTTGGCTTAGTGCTAGTAGTGACGCGCGACG False NODE_30_length_15853_cov_41.3164_ID_59 4310 2531225 2 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1036874-2.2.2.1 GACAATGAGCAGAATTGTAGGGAATTTACAGAC False NODE_15_length_110824_cov_43.9277_ID_29 9031 1036874 2.2.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -1037658-2.2.2.2.1.4 GATGTGTTTGAACAGTATAATGCCGCCGTGCAA False NODE_15_length_110824_cov_43.9277_ID_29 9815 1037658 2.2.2.2.1.4 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1037736-2.2.2.1.1 GACTACCTGTTGAAAACCCGTGTACCGGATATG False NODE_15_length_110824_cov_43.9277_ID_29 9893 1037736 2.2.2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1047714-2.2.1.1.1 GCGAACTGGCGAAACGTCTTGGCGTGGAACAAC False NODE_15_length_110824_cov_43.9277_ID_29 19832 1047714 2.2.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1049933-1.1 CCAGCTAACGCGTTGACGCGCATTCGGCCTGCA False NODE_15_length_110824_cov_43.9277_ID_29 22051 1049933 1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1052031-2.2.2.2.1.3 ACCGTCGTTGCCTTGCAGGGGCTGACGCTGGCA False NODE_15_length_110824_cov_43.9277_ID_29 24149 1052031 2.2.2.2.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1061770-2.2.2.1 AAAATAAAGACGTTAAGCCGGGGTTAAGCATTC False NODE_15_length_110824_cov_43.9277_ID_29 33888 1061770 2.2.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1062011-2.1.2 TGTTGTGTGACGCATGCCGCATTTTCTCCTCGC False NODE_15_length_110824_cov_43.9277_ID_29 34129 1062011 2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1091342-2.2.3.1 TTAAAACCAATCTGGGCATAAGTCTGGTCGGCA False NODE_15_length_110824_cov_43.9277_ID_29 63460 1091342 2.2.3.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4327318-2.1.2 TTCCCGGCGAACCGTGTGGGTGACGACATCGAA True NODE_21_length_77933_cov_46.5295_ID_41 66497 4327318 2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1313808-2.1 CAATATGCGCGAAAAAGTGGTTGAGCATCCGCA True NODE_16_length_96818_cov_43.859_ID_31 13141 1313808 2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1288160-2.2.2.2.4 GCGTGGTATCGTCCTGCGCCAGATTTTGTGGCG True NODE_16_length_96818_cov_43.859_ID_31 38789 1288160 2.2.2.2.4 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative1276017-2.1 TGCTTGATTTGGGGGCCAACGTCGACTGTGACA True NODE_16_length_96818_cov_43.859_ID_31 50932 1276017 2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative862828-2.1 CGCCAAGTCTGGCACCTAACGGCACGATGGTAA True NODE_24_length_52535_cov_38.5337_ID_47 1940 862828 2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative848800-2.2.3.1 TCGTTATCAACAACCAGGTGGGTTTCACCACCT True NODE_24_length_52535_cov_38.5337_ID_47 15968 848800 2.2.3.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative842143-2.1.1.1.1 TGCCCAGCTCTTTCAGCACTTCGTGGCAGGTTT True NODE_24_length_52535_cov_38.5337_ID_47 22625 842143 2.1.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4120499-2.1.1.3 GTCGTACCAGATGAAGCGAAGTGTGTATTTTGT True NODE_19_length_89272_cov_52.2838_ID_37 4435 4120499 2.1.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4101230-2.1.2 CTTTTATTGCCTCGCAGATCGTTTTTCCTGTCA True NODE_19_length_89272_cov_52.2838_ID_37 23704 4101230 2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4086376-2.2.2.1.3 AGGTCTACCATCGCCCGTCGCGTTTCATCGGCG True NODE_19_length_89272_cov_52.2838_ID_37 38558 4086376 2.2.2.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4081360-2.2.2.2.1.5 TGCTGGTGGTTGAGCCGCCCTATGATCCTGAGT True NODE_19_length_89272_cov_52.2838_ID_37 43574 4081360 2.2.2.2.1.5 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4079393-2.2.3.2.1 ACCAGGATCATGACGCGCCGCTATTGCAGCAGT True NODE_19_length_89272_cov_52.2838_ID_37 45541 4079393 2.2.3.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4047770-2.2.2.1.2 TCCTGTTGTAATGTGGGTTCATTCGCACAGATA True NODE_19_length_89272_cov_52.2838_ID_37 77164 4047770 2.2.2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4035893-2.1.2 GTGTTGGGAGTTCGAGTCTCTCCGCCCCTGCCA True NODE_19_length_89272_cov_52.2838_ID_37 89041 4035893 2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3523461-2.2.2.2.4 CGATTTTACCGCCAGCAGCTTCGATAGCAGCAC False NODE_29_length_26108_cov_56.5784_ID_57 15150 3523461 2.2.2.2.4 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -4241351-2.2 GGGATTACGTCCATAAAGAATCCATGTTTTTTG True NODE_11_length_138141_cov_49.5639_ID_21 27082 4241351 2.2 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4215208-2.1.2 TAAGCGCAGCGCCATCAGACATTGATTGGCAAT True NODE_11_length_138141_cov_49.5639_ID_21 53225 4215208 2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4211912-2.2.1.1.1.1 GGAGTGCCGAATCAAATTTCCAGCGCATTGTCC True NODE_11_length_138141_cov_49.5639_ID_21 56521 4211912 2.2.1.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4178681-2.2.3.2 TCCACGCCCATCGCCTGTGCGATGCGAGCAAAA True NODE_11_length_138141_cov_49.5639_ID_21 89752 4178681 2.2.3.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4166216-1.2 TTTTTGTACTGTGAAACGATGATGCTATACGCC True NODE_11_length_138141_cov_49.5639_ID_21 102217 4166216 1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4157035-2.2.2.2.1.2 CCCAGGACTCCAGGCACATCTGCTCTTCTTCAC True NODE_11_length_138141_cov_49.5639_ID_21 111398 4157035 2.2.2.2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4145957-2.1 CGGTCGTCGTGGTAACGAGATCTTCAATTCTGC True NODE_11_length_138141_cov_49.5639_ID_21 122476 4145957 2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4136928-2.1.2 GATTTTGGAGTATCGTGGTCTGGCGAAGCTAAA True NODE_11_length_138141_cov_49.5639_ID_21 131505 4136928 2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative4136269-2.2.2.2.2 CCGCTGCTGGAAGATGAAAAAGTGCGCAAAGTG True NODE_11_length_138141_cov_49.5639_ID_21 132164 4136269 2.2.2.2.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3540924-2.2.2.2.2.2 ACCGCCGCTATTACAAGCGGCGGCTCTCAGTTT False NODE_4_length_411654_cov_48.8368_ID_7 5596 3540924 2.2.2.2.2.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3553986-2.2.3.3 AGAAGCTATCCGACTGATCCTCAGTAACGATCC False NODE_4_length_411654_cov_48.8368_ID_7 18658 3553986 2.2.3.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3580227-2.2.2.2.5 GCACCGCATCCCAGGACGTTTTCAGCGCTATTT False NODE_4_length_411654_cov_48.8368_ID_7 44668 3580227 2.2.2.2.5 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3586333-2.2.2.2.2.1 CGCTGGGGACTGTTTGGGGAGAATAATCAGGAG False NODE_4_length_411654_cov_48.8368_ID_7 50774 3586333 2.2.2.2.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3587211-2.2.1.1.2 TATTTCTCGCGAGACCGCGCGTGCCGCCCAGTC False NODE_4_length_411654_cov_48.8368_ID_7 51652 3587211 2.2.1.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3647258-2.2.2.2.2.1 TACGGGTAACTGTTATCGGTAACATTGTCCAAC False NODE_4_length_411654_cov_48.8368_ID_7 111699 3647258 2.2.2.2.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3671709-2.2.3.1.5 TCAGCGAGCAACAACCGTGCCAAAGCCGATGAG False NODE_4_length_411654_cov_48.8368_ID_7 136150 3671709 2.2.3.1.5 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -3677767-2 CTGGAGCAATTTAACCCCCCGTTCGGCCAACTG False NODE_4_length_411654_cov_48.8368_ID_7 142208 3677767 2 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3686624-2.2.2.2.5 CCGAAAGAAGACTAACGTCCCAGCGCTTTGCCG False NODE_4_length_411654_cov_48.8368_ID_7 151065 3686624 2.2.2.2.5 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3691258-2.2.2.1.1 GCACGTGACGTTTAGAGACGGAGTCCAGCTCAG False NODE_4_length_411654_cov_48.8368_ID_7 155699 3691258 2.2.2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3696399-2.2.2.2.2 TCATTTGTATAATAACCTATTGATCAGGCTAAT False NODE_4_length_411654_cov_48.8368_ID_7 160840 3696399 2.2.2.2.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3742501-2.1.1.3 CCTGCTGCCGCTGCACGATGGCAACCACTTCCC False NODE_4_length_411654_cov_48.8368_ID_7 206942 3742501 2.1.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -3766668-2.2 GGCCGTACCGTCGGTCTTGCCCAAAAGATAGTC False NODE_4_length_411654_cov_48.8368_ID_7 231109 3766668 2.2 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -3785187-2.2.2.2.1.4 TTAAAAAGCACCTCAGAGAATAGTCTTAATCCG False NODE_4_length_411654_cov_48.8368_ID_7 249628 3785187 2.2.2.2.1.4 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -3791096-2.2.2 AACTGCCGGTGGACGGAGGTTTCGACGATAACG False NODE_4_length_411654_cov_48.8368_ID_7 255537 3791096 2.2.2 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3801966-2.1.1 TCAACCATATTTACGATCACGTTAAGCCCATCC False NODE_4_length_411654_cov_48.8368_ID_7 266407 3801966 2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3802645-2.1 ATCGCGCCAGCCGCAGACGCTAACGTTCATTCC False NODE_4_length_411654_cov_48.8368_ID_7 267086 3802645 2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3811523-2.2.2.1.1 CACAATACTAATGAAGAGAAAGTACGCGACCAT False NODE_4_length_411654_cov_48.8368_ID_7 275964 3811523 2.2.2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3819645-2.2.2.2.3 TCGAATCTGGATACCCGCGTCACCAATATCGAA False NODE_4_length_411654_cov_48.8368_ID_7 284086 3819645 2.2.2.2.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3822905-2.2.1.1.3 GAGTCGCCAGCGTATGTATCTCGTTCCGCCCGT False NODE_4_length_411654_cov_48.8368_ID_7 287346 3822905 2.2.1.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -3827083-2.2.2.2.1 ACCGGGGAAATGCTGAACAGTTTCCGGGAACAC False NODE_4_length_411654_cov_48.8368_ID_7 291524 3827083 2.2.2.2.1 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3855172-2.2.3.1.3 CCGGTACTGATGGGTCCGCATACCTTTAACTTT False NODE_4_length_411654_cov_48.8368_ID_7 319613 3855172 2.2.3.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3864871-2.2.1.1 CCCTGACCTGGTTACTGATATTCAGAGCAGCTT False NODE_4_length_411654_cov_48.8368_ID_7 329312 3864871 2.2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3867228-1.1 TTACCGTTTTGATAAACCAGTGTTACCGCTACG False NODE_4_length_411654_cov_48.8368_ID_7 331669 3867228 1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3913221-1.3 CGGAGATCCCCAGATCCTGCGCCATCGGCGTCA False NODE_4_length_411654_cov_48.8368_ID_7 377662 3913221 1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3931056-2.2.3.2.1 ATATTCATCATCAAACTACCGTCGCCGGAAAAA False NODE_4_length_411654_cov_48.8368_ID_7 395497 3931056 2.2.3.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3932517-2.2.3.2 CGGCGCATTGCCGACGACCACCACCACACGCAC False NODE_4_length_411654_cov_48.8368_ID_7 396958 3932517 2.2.3.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3939049-2.1.1.2 GAGATCATTGCGATTGCCATTGGTTCCGGCGCC False NODE_4_length_411654_cov_48.8368_ID_7 403490 3939049 2.1.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3943311-2.2.1.1.2 AGGATCGGCACATCCTGGATAGCCATATTATTG False NODE_4_length_411654_cov_48.8368_ID_7 407752 3943311 2.2.1.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2503823-2.2.3.1.2 TAAATGGATATAACGAGCCCCTCCTAAGGGCTA True NODE_8_length_161629_cov_42.8911_ID_15 12211 2503823 2.2.3.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2496132-2.1.1.2 GCTCCCTGCGCTCCGCCATGCGCACTAATTGTT True NODE_8_length_161629_cov_42.8911_ID_15 19902 2496132 2.1.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2482056-2.2.3.1 GGATCGGCCATTATTGCCTGCTGAACATAATAC True NODE_8_length_161629_cov_42.8911_ID_15 33978 2482056 2.2.3.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2455459-2.2.2.2.1.2 ATCACGAGCCTTACGCACGCCGGAACAGGTCTC True NODE_8_length_161629_cov_42.8911_ID_15 60575 2455459 2.2.2.2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -2438389-2.2 TAGGCCAGCCGCCAGGTAATACCCGCTGCATTT True NODE_8_length_161629_cov_42.8911_ID_15 77645 2438389 2.2 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2422397-2.1.1 CCCGCTGGTAAGCCGGCAGTTGCTAAGTTAAAT True NODE_8_length_161629_cov_42.8911_ID_15 93637 2422397 2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative2406889-2.2.2.2.1.2 TTGCCTATCACGATATGGGATGTCAGGGCGTGC True NODE_8_length_161629_cov_42.8911_ID_15 109145 2406889 2.2.2.2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3060368-2.2.3.2.1 ACCAGGCGGTATGATACAGTTCGACAATGTCCG False NODE_3_length_427905_cov_48.1477_ID_5 31346 3060368 2.2.3.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3062689-2.2.2.2.2.2 CCAGAACCGACCGCACGCAAAAGCTTCTGAACC False NODE_3_length_427905_cov_48.1477_ID_5 33667 3062689 2.2.2.2.2.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3082064-1.2 GACGTTCGCTATCCACCCCGCGTAAAAAGAGAT False NODE_3_length_427905_cov_48.1477_ID_5 52936 3082064 1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3090898-1.2 CGCATGGCTTTCCAGTTCAAGGATGTCCGCCTG False NODE_3_length_427905_cov_48.1477_ID_5 61770 3090898 1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3113857-1.2 TTCATGACGTCATCCCAGTCTTTTTCCGTGAAA False NODE_3_length_427905_cov_48.1477_ID_5 84729 3113857 1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3118525-2.2.3.1.3 CCTGGCCTCTAACATACTGGCCGCATAAGGCGC False NODE_3_length_427905_cov_48.1477_ID_5 89397 3118525 2.2.3.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3159204-2.2.1.1.3 CCGCCTCGCCAACCTGCGGCGGAGTCGCGAGCT False NODE_3_length_427905_cov_48.1477_ID_5 130070 3159204 2.2.1.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3187428-2.2.3.1.1 CTTTATCAGCGCGCAGTGTCCCATTCCATCATC False NODE_3_length_427905_cov_48.1477_ID_5 158294 3187428 2.2.3.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3200083-2.1 ACCCGGTCTACCGCAAAATGGAAAGCGATATGC False NODE_3_length_427905_cov_48.1477_ID_5 170949 3200083 2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3204925-2.2.3.1.5 CTCGCTGGCAAGCAGTGCGGGTACTATCGGCGG False NODE_3_length_427905_cov_48.1477_ID_5 175791 3204925 2.2.3.1.5 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -3212817-2.2.2.2 CAAAACTACGAATACGACGCAGCGGGCGACCGT False NODE_3_length_427905_cov_48.1477_ID_5 183683 3212817 2.2.2.2 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3230678-2.2.2.1.1.1 AGCGGTGCGCCAAACCACCCGGAATGATGAGTG False NODE_3_length_427905_cov_48.1477_ID_5 201544 3230678 2.2.2.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3233869-2.1.1.1.1 CAGCGCTGGTATGTGGCTGCACCATCGTCATTA False NODE_3_length_427905_cov_48.1477_ID_5 204735 3233869 2.1.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3254229-2.2.3.1.3 CGCCACCACGCGGTTAGCGTCACGCTGACATTC False NODE_3_length_427905_cov_48.1477_ID_5 225095 3254229 2.2.3.1.3 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3257074-2.2.1 CGGCAACCAGACCGACTACGCCGCCAAGCAGAC False NODE_3_length_427905_cov_48.1477_ID_5 227940 3257074 2.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3264474-2.2.2.1.1.1 AATGGCGCCGATCGTCGCCAGATAACCGTTGCC False NODE_3_length_427905_cov_48.1477_ID_5 235340 3264474 2.2.2.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3267927-2.2.2.2.2.1 AAAGAGAAATATGATGCCAGGCTGATACATGAC False NODE_3_length_427905_cov_48.1477_ID_5 238793 3267927 2.2.2.2.2.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3278067-1.1 TGTGAGTAAGTTGCGCGATATTCTGCTGGATTC False NODE_3_length_427905_cov_48.1477_ID_5 248933 3278067 1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3299717-2.2.3.1.4 ATGCCGGACAGCAGGCGAAACTCGAACCGGATA False NODE_3_length_427905_cov_48.1477_ID_5 270583 3299717 2.2.3.1.4 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3305400-2.1.1.1 CATCGTGAAGCAGAACAGACGCGCATTCTTGCT False NODE_3_length_427905_cov_48.1477_ID_5 276266 3305400 2.1.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -3324813-2.2.2.2 CAGATGAAGCGGGCGCAGGATAACTTCAAGGCC False NODE_3_length_427905_cov_48.1477_ID_5 295679 3324813 2.2.2.2 True SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3373069-2.2.2.2.1.1 CTCTCCAGAAGATGAAGCCCGTGATGCGGCGCA False NODE_3_length_427905_cov_48.1477_ID_5 344042 3373069 2.2.2.2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3408895-2.1.1 ACAGTAAAAACAGGATCTGCTGCGAGGCCAGAC False NODE_3_length_427905_cov_48.1477_ID_5 379868 3408895 2.1.1 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS -negative3436797-2.2.2.1.2 ATGCGGTATTCCTTGGCGTCGGCACCTATCAGT False NODE_3_length_427905_cov_48.1477_ID_5 407770 3436797 2.2.2.1.2 False SRR1002850_SMALL.fasta /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta heidelberg 0.5.0 PASS
--- a/test-data/results.tab Fri Apr 20 10:44:35 2018 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,2 +0,0 @@ -sample scheme scheme_version subtype all_subtypes tiles_matching_subtype are_subtypes_consistent n_tiles_matching_all n_tiles_matching_all_expected n_tiles_matching_positive n_tiles_matching_positive_expected n_tiles_matching_subtype n_tiles_matching_subtype_expected file_path qc_status qc_message -SRR1002850_SMALL.fasta heidelberg 0.5.0 2.2.2.2.1.4 2; 2.2; 2.2.2; 2.2.2.2; 2.2.2.2.1; 2.2.2.2.1.4 2154958-2.2.2.2.1.4; 1037658-2.2.2.2.1.4; 3785187-2.2.2.2.1.4 True 202 202 17 17 3 3 /tmp/tmpUDraZv/job_working_directory/000/4/working/SRR1002850_SMALL.fasta.fasta PASS