Mercurial > repos > nml > metaspades
changeset 16:9638ba70882c draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/spades commit 099f08cce5c93f4ed22bc8b02296fd4b5d357390
| author | iuc |
|---|---|
| date | Mon, 03 Mar 2025 11:07:37 +0000 |
| parents | 99ecfdafc64f |
| children | |
| files | macros.xml |
| diffstat | 1 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/macros.xml Mon Apr 15 19:39:03 2024 +0000 +++ b/macros.xml Mon Mar 03 11:07:37 2025 +0000 @@ -1,6 +1,6 @@ <macros> <token name="@TOOL_VERSION@">3.15.5</token> - <token name="@VERSION_SUFFIX@">2</token> + <token name="@VERSION_SUFFIX@">3</token> <xml name="requirements"> <requirements> <requirement type="package" version="@TOOL_VERSION@">spades</requirement> @@ -385,16 +385,16 @@ <token name="@STATS@"><![CDATA[ #if 'cs' in $optional_output - && test -f 'output/contigs.fasta' && python '$__tool_directory__/write_tsv_script.py' < 'output/contigs.fasta' > '$out_cs' || echo 'No contigs.fasta.' + && (test -f 'output/contigs.fasta' && python '$__tool_directory__/write_tsv_script.py' < 'output/contigs.fasta' > '$out_cs' || echo 'No contigs.fasta.') #end if #if 'ss' in $optional_output - && test -f 'output/scaffolds.fasta' && python '$__tool_directory__/write_tsv_script.py' < 'output/scaffolds.fasta' > '$out_ss' || echo 'No scaffolds.fasta.' + && (test -f 'output/scaffolds.fasta' && python '$__tool_directory__/write_tsv_script.py' < 'output/scaffolds.fasta' > '$out_ss' || echo 'No scaffolds.fasta.') #end if ]]></token> <token name="@CORRECTED@"><![CDATA[ #if 'corrected' in $optional_output - && test -d 'output/corrected' && zip -q -r 'corrected.zip' 'output/corrected/*.fastq.gz' || echo 'No output files for corrected reads.' + && (test -d 'output/corrected' && zip -q -r 'corrected.zip' 'output/corrected/*.fastq.gz' || echo 'No output files for corrected reads.') #end if ]]></token>