Mercurial > repos > nml > mob_suite
comparison mob_typer.xml @ 5:09424ec94e80 draft
"planemo upload for repository https://github.com/phac-nml/mob-suite commit e3f242a0dbf429ac0394b6962441aaef367645a8"
| author | nml |
|---|---|
| date | Wed, 13 Nov 2019 14:09:11 -0500 |
| parents | 2c7f721a4905 |
| children | 9424de64bfa8 |
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| 4:1c5dfecfbb4d | 5:09424ec94e80 |
|---|---|
| 1 <tool id="mob_typer" name="MOB-Typer" version="1.4.8"> | 1 <tool id="mob_typer" name="MOB-Typer" version="1.4.9.1+galaxy0"> |
| 2 <description>Get the plasmid type and mobility given its sequence</description> | 2 <description>Get the plasmid type and mobility given its sequence</description> |
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type="package" version="1.4.8">mob_suite</requirement> | 4 <requirement type="package" version="1.4.9.1">mob_suite</requirement> |
| 5 </requirements> | 5 </requirements> |
| 6 <command detect_errors="exit_code"> | 6 <command detect_errors="exit_code"> |
| 7 <![CDATA[ | 7 <![CDATA[ |
| 8 ln -s "${input}" "${input.name}"; | 8 ln -s "${input}" "${input.name}"; |
| 9 mob_typer --num_threads \${GALAXY_SLOTS:-4} --infile "${input.name}" | 9 mob_typer --num_threads \${GALAXY_SLOTS:-4} --infile "${input.name}" |