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changeset 1:e2725e0b0113 draft default tip

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planemo upload
author nml
date Thu, 04 May 2017 16:10:52 -0400
parents 9121e9f3f285
children
files neptune.xml
diffstat 1 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/neptune.xml	Thu May 04 15:23:54 2017 -0400
+++ b/neptune.xml	Thu May 04 16:10:52 2017 -0400
@@ -1,5 +1,5 @@
-<tool id="neptune" name="Neptune: Signature Discovery" version="1.2.5.1">
-  <description>Neptune identifies genomic signatures using an exact k-mer matching strategy while accommodating k-mer mismatches.</description>
+<tool id="neptune" name="Neptune: Signature Discovery" version="1.2.5.2">
+  <description>identifies discriminatory sequences between two groups of sequences</description>
 
   <requirements>
     <requirement type="package" version="1.2.5">neptune</requirement>
@@ -63,9 +63,9 @@
       </when>
       <when value="advanced">
         <param name="kmer" type="integer" label="k" help="The size of the k-mers. This value is automatically calculated if left blank." optional="true"/>
-        <param name="size" type="integer" label="Size" help="The minimum size of reported signatures. The default size is 4k." optional="true"/>
+        <param name="size" type="integer" label="Size" help="  The minimum size of all reported candidate signatures. Identified candidate signatures shorter than this value will be discard. The default size is 4k." optional="true"/>
         <param name="rate" type="float" label="Rate" help="The probability of a mutation or error at an arbitrary position. The default value is 0.01." optional="true" value="0.01"/>
-        <param name="exhits" type="integer" label="Minimum Exclusion" help="The minimum number of inclusion targets that must contain a k-mer observed in the reference to begin or continue building candidate signatures. This will be calculated if not specified." optional="true"  value="1"/>
+        <param name="exhits" type="integer" label="Maximum Exclusion" help="The maximum allowable number of exclusion targets that may contain a k-mer observed in the reference before terminating the construction of a candidate signature." optional="true"  value="1"/>
       </when>
     </conditional>
   </inputs>