Mercurial > repos > nml > package_python_3_4_hivtrace_0_1_4
comparison tool_dependencies.xml @ 1:af0cf1f508fa draft
planemo upload for repository https://github.com/phac-nml/galaxy_tools/tree/master/packages/package_python_3_4_hivtrace_0_1_4 commit e2554dc878f6abf1c02ed9e6e4f4440ed32b02aa-dirty
author | nml |
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date | Thu, 07 Jul 2016 13:43:14 -0400 |
parents | 38541eaf0d20 |
children | 8ba7ea2370cb |
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0:38541eaf0d20 | 1:af0cf1f508fa |
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4 <repository changeset_revision="20ecf5cd3c0e" name="package_python_3_4" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> | 4 <repository changeset_revision="20ecf5cd3c0e" name="package_python_3_4" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> |
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33 <package name="hivtrace" version="0.1.4"> | 39 <package name="hivtrace" version="0.1.4"> |
34 <install version="1.0"> | 40 <install version="1.0"> |
35 <actions> | 41 <actions> |
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37 <action type="set_environment_for_install"> | 43 <action type="set_environment_for_install"> |
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41 <repository changeset_revision="085a17b297b1" name="package_python_3_4_pysam_0_8_3" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu"> | 47 <repository changeset_revision="085a17b297b1" name="package_python_3_4_pysam_0_8_3" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu"> |
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48 <package name="biopython" version="1.66" /> | 54 <package name="biopython" version="1.66" /> |
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50 <repository changeset_revision="d71e21675123" name="package_python_3_4_bioext_0_17_3" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu"> | 56 <repository changeset_revision="1ca9f5fd8b65" name="package_python_3_4_bioext_0_17_3" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu"> |
51 <package name="bioext" version="0.17.3" /> | 57 <package name="bioext" version="0.17.3" /> |
52 </repository> | 58 </repository> |
53 <repository changeset_revision="594976628691" name="package_python_3_4_hivclustering_1_2_3" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu"> | 59 <repository changeset_revision="eda1cbde6572" name="package_python_3_4_hivclustering_1_2_3" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu"> |
54 <package name="hivclustering" version="1.2.3" /> | 60 <package name="hivclustering" version="1.2.3" /> |
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62 <repository changeset_revision="52c11d398790" name="package_python_3_4_cython_0_23_4" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu"> | |
63 <package name="cython" version="0.23.4" /> | |
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65 <repository changeset_revision="13da2754601c" name="package_python_3_4_fakemp_0_9_1" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu"> | |
66 <package name="fakemp" version="0.9.1" /> | |
67 </repository> | |
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69 <package name="hppy" version="0.9.6" /> | |
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56 <repository changeset_revision="e1abbe60f3d4" name="package_tn93_1_0_2" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu"> | 71 <repository changeset_revision="e1abbe60f3d4" name="package_tn93_1_0_2" owner="nml" toolshed="https://toolshed.g2.bx.psu.edu"> |
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74 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> | 89 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> |
75 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_BIOPYTHON]</environment_variable> | 90 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_BIOPYTHON]</environment_variable> |
76 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_BIOEXT]</environment_variable> | 91 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_BIOEXT]</environment_variable> |
77 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable> | 92 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable> |
78 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_PYSAM]</environment_variable> | 93 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_PYSAM]</environment_variable> |
94 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_HYPHY_PYTHON]</environment_variable> | |
95 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_CYTHON]</environment_variable> | |
96 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_HIVCLUSTERING]</environment_variable> | |
97 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_FAKEMP]</environment_variable> | |
98 <environment_variable action="append_to" name="PYTHONPATH">$ENV[PYTHONPATH_HPPY]</environment_variable> | |
79 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable> | 99 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable> |
80 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_PYSAM]</environment_variable> | 100 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_PYSAM]</environment_variable> |
81 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> | 101 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> |
82 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_HIVCLUSTERING]</environment_variable> | 102 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_HIVCLUSTERING]</environment_variable> |
83 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_BIOEXT]</environment_variable> | 103 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_BIOEXT]</environment_variable> |