Mercurial > repos > nml > package_spolpred_1_0_0

changeset 0:bb26e23d7178 draft default tip

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planemo upload commit 870da8582a7bc43817b1de0720397ae60a8efef6-dirty
author nml
date Tue, 15 Dec 2015 14:18:56 -0500
parents
children
files tool_dependencies.xml
diffstat 1 files changed, 23 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue Dec 15 14:18:56 2015 -0500
@@ -0,0 +1,23 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="spolpred" version="1.0.0">
+        <install version="1.0">
+            <actions>
+                <action type="make_directory">spolpred</action>
+                <action type="change_directory">spolpred</action>
+                <action type="shell_command">wget "http://pathogenseq.lshtm.ac.uk/downloads/spolpred.cpp"</action>
+                <action type="shell_command">g++ spolpred.cpp</action>
+                <action type="shell_command">mv a.out spolpred</action>
+                <action type="set_environment">
+                  <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/spolpred</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+This installs SpolPred 1.0.0.
+
+See manual here http://pathogenseq.lshtm.ac.uk/downloads/spolpredmanual.pdf
+See also here http://pathogenseq.lshtm.ac.uk/spolpred
+        </readme>
+    </package>
+</tool_dependency>